RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ZNF587Q96SQ5 575 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-217ENST00000530253 NRXN3Q9Y4C0 1643 aa12.7□□□□□ -0.38
CCDC90B-217ENST00000530253 USP17L3A6NCW0 530 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 USP17L4A6NCW7 530 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 SFSWAPQ12872 951 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 HIF1AQ16665 826 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 USP17L2Q6R6M4 530 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 USP17L1Q7RTZ2 530 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 CEP63Q96MT8 703 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 BRD7Q9NPI1 651 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 MYOM2P54296 1465 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 IQGAP1P46940 1657 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 PLEKHG1Q9ULL1 1385 aa12.69□□□□□ -0.38
CCDC90B-217ENST00000530253 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 ADH7P40394 386 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 KCNQ4P56696 695 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 FLIIQ13045 1269 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 ANKLE2Q86XL3 938 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 LARGE2Q8N3Y3 721 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 SETBP1Q9Y6X0 1596 aa12.68□□□□□ -0.38
CCDC90B-217ENST00000530253 CLSPNQ9HAW4 1339 aa12.67□□□□□ -0.38
CCDC90B-217ENST00000530253 PALM3A6NDB9 673 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-217ENST00000530253 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-217ENST00000530253 POTEAQ6S8J7 498 aa12.67□□□□□ -0.38
CCDC90B-217ENST00000530253 TXNDC2Q86VQ3 553 aa12.67□□□□□ -0.38
CCDC90B-217ENST00000530253 SLC30A3Q99726 388 aa12.67□□□□□ -0.38
CCDC90B-217ENST00000530253 ADAMTS13Q76LX8 1427 aa12.66□□□□□ -0.38
CCDC90B-217ENST00000530253 ZNF326Q5BKZ1 582 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-217ENST00000530253 TSPAN10Q9H1Z9 355 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-217ENST00000530253 KCNH4Q9UQ05 1017 aa12.66□□□□□ -0.38
CCDC90B-217ENST00000530253 ATP9BO43861 1147 aa12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 RGL3Q3MIN7 710 aa12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 SH3PXD2AQ5TCZ1 1133 aa12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 MICALL1Q8N3F8 863 aa12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 POM121Q96HA1 1249 aa12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 PHACTR1Q9C0D0 580 aa12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 EID1Q9Y6B2 187 aa12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-217ENST00000530253 PIK3C2GO75747 1445 aa12.64□□□□□ -0.39
CCDC90B-217ENST00000530253 ZBTB7BO15156 539 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-217ENST00000530253 CLDN10P78369 228 aa12.64□□□□□ -0.39
CCDC90B-217ENST00000530253 OGFOD1Q8N543 542 aa12.64□□□□□ -0.39
CCDC90B-217ENST00000530253 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
CCDC90B-217ENST00000530253 KIAA1024Q9UPX6 916 aa12.64□□□□□ -0.39
CCDC90B-217ENST00000530253 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
CCDC90B-217ENST00000530253 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
CCDC90B-217ENST00000530253 ALBP02768 609 aa12.63□□□□□ -0.39
CCDC90B-217ENST00000530253 TYRO3Q06418 890 aa12.63□□□□□ -0.39
CCDC90B-217ENST00000530253 SIX5Q8N196 739 aa12.63□□□□□ -0.39
CCDC90B-217ENST00000530253 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
CCDC90B-217ENST00000530253 SFI1A8K8P3 1242 aa12.62□□□□□ -0.39
CCDC90B-217ENST00000530253 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-217ENST00000530253 ZMYM1Q5SVZ6 1142 aa12.62□□□□□ -0.39
CCDC90B-217ENST00000530253 HSH2DQ96JZ2 352 aa12.62□□□□□ -0.39
CCDC90B-217ENST00000530253 STARD13Q9Y3M8 1113 aa12.62□□□□□ -0.39
CCDC90B-217ENST00000530253 HCN4Q9Y3Q4 1203 aa12.62□□□□□ -0.39
CCDC90B-217ENST00000530253 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-217ENST00000530253 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
CCDC90B-217ENST00000530253 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-217ENST00000530253 SUSD3Q96L08 255 aa12.61□□□□□ -0.39
CCDC90B-217ENST00000530253 MKRN1Q9UHC7 482 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-217ENST00000530253 STRCP1A6NGW2 1772 aa12.61□□□□□ -0.39
CCDC90B-217ENST00000530253 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
CCDC90B-217ENST00000530253 ALKQ9UM73 1620 aa12.6□□□□□ -0.39
CCDC90B-217ENST00000530253 LILRB5O75023 590 aa12.6□□□□□ -0.39
CCDC90B-217ENST00000530253 RSPO4Q2I0M5 234 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-217ENST00000530253 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
CCDC90B-217ENST00000530253 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
CCDC90B-217ENST00000530253 PRAG1Q86YV5 1406 aa12.6□□□□□ -0.39
CCDC90B-217ENST00000530253 POM121CA8CG34 1229 aa12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 NID1P14543 1247 aa12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 ITGB7P26010 798 aa12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 COL9A3Q14050 684 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 SLC26A8Q96RN1 970 aa12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 LAMC1P11047 1609 aa12.59□□□□□ -0.39
CCDC90B-217ENST00000530253 ADGRB1O14514 1584 aa12.58□□□□□ -0.4
CCDC90B-217ENST00000530253 ADAMTS19Q8TE59 1207 aa12.58□□□□□ -0.4
CCDC90B-217ENST00000530253 UCN2Q96RP3 112 aa12.58□□□□□ -0.4
CCDC90B-217ENST00000530253 TPSG1Q9NRR2 321 aa12.58□□□□□ -0.4
CCDC90B-217ENST00000530253 TBX22Q9Y458 520 aa12.58□□□□□ -0.4
CCDC90B-217ENST00000530253 METP08581 1390 aa12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 XRN1Q8IZH2 1706 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 PTPRUQ92729 1446 aa12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 C9orf172C9J069 976 aa12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 NKAPLQ5M9Q1 402 aa12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 C20orf204Q6ZNR8 217 aa12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 TSEN2Q8NCE0 465 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 BHMTQ93088 406 aa12.57□□□□□ -0.4
CCDC90B-217ENST00000530253 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
CCDC90B-217ENST00000530253 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
CCDC90B-217ENST00000530253 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
CCDC90B-217ENST00000530253 TRAPPC3LQ5T215 181 aa12.56□□□□□ -0.4
CCDC90B-217ENST00000530253 ALDH16A1Q8IZ83 802 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms