RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 RASA3Q14644 834 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 AMOTQ4VCS5 1084 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 CCDC93Q567U6 631 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 RC3H1Q5TC82 1133 aaKnown RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 JAZF1Q86VZ6 243 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 IQCF2Q8IXL9 164 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 DRC7Q8IY82 874 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 REM2Q8IYK8 340 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 VPS37AQ8NEZ2 397 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 GIPC2Q8TF65 315 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 KLRG1Q96E93 195 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 FMNL2Q96PY5 1086 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 DONSONQ9NYP3 566 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 PASKQ96RG2 1323 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 ANKRD33BA6NCL7 494 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 TMEM88BA6NKF7 163 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 SLC27A2O14975 620 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 PAK3O75914 559 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 RGS20O76081 388 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 ENPP1P22413 925 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 CASQ1P31415 396 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 ZNF132P52740 706 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 SLC15A2Q16348 729 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 ELOA2Q8IYF1 753 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 CCDC47Q96A33 483 aaKnown RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 SUDS3Q9H7L9 328 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 CD248Q9HCU0 757 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 PCDH12Q9NPG4 1184 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 GINM1Q9NU53 330 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 ZBTB47Q9UFB7 747 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 TBC1D2BQ9UPU7 963 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 USTQ9Y2C2 406 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 IL16Q14005 1332 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 GOLGA6L3A6NEY3 463 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 IPO7O95373 1038 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 TPM2P07951 284 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 VIL1P09327 827 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 HMGN5P82970 282 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 ARMC3Q5W041 872 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 PDXDC1Q6P996 788 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 CATIPQ7Z7H3 387 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 PMFBP1Q8TBY8 1022 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 NCAPGQ9BPX3 1015 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 TTF2Q9UNY4 1162 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 COL4A3BPQ9Y5P4 624 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 ECEL1O95672 775 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 COL6A1P12109 1028 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 COL19A1Q14993 1142 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 ZNF394Q53GI3 561 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 KCNV1Q6PIU1 500 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 KRT28Q7Z3Y7 464 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 EFCC1Q9HA90 598 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 AVENQ9NQS1 362 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 MKS1Q9NXB0 559 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 CGNQ9P2M7 1197 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 GNEQ9Y223 722 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 NPC1L1Q9UHC9 1359 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 KIF1CO43896 1103 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 DNAJC21Q5F1R6 531 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 SWT1Q5T5J6 900 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 ANKRD13DQ6ZTN6 518 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 CCAR1Q8IX12 1150 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 SLF2Q8IX21 1173 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 FRS2Q8WU20 508 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 LZTS2Q9BRK4 669 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 BCL2L13Q9BXK5 485 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 DMGDHQ9UI17 866 aaKnown RBP4.49□□□□□ -1.69
PTPN22-207ENST00000528414 RABL2BQ9UNT1 228 aa4.49□□□□□ -1.69
PTPN22-207ENST00000528414 CDHR2Q9BYE9 1310 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 CNTNAP4Q9C0A0 1308 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 TMEM238LA0A1B0GVL6 79 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 PRSS47A8MTI9 375 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 SRGNP10124 158 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 VAMP1P23763 118 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 MAN1A1P33908 653 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 CLCN1P35523 988 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 ZBED6P86452 979 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 CCDC92Q53HC0 331 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-207ENST00000528414 MAP7D2Q96T17 732 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 SMC4Q9NTJ3 1288 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 CUEDC1Q9NWM3 386 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-207ENST00000528414 DDX56Q9NY93 547 aaKnown RBP4.48□□□□□ -1.69
PTPN22-207ENST00000528414 HOXC10Q9NYD6 342 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 LOC285556D6RIA3 1793 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 CEMIPQ8WUJ3 1361 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 TULP2O00295 520 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 WASLO00401 505 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-207ENST00000528414 WASHC5Q12768 1159 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 MAPRE1Q15691 268 aaKnown RBP4.48□□□□□ -1.69
PTPN22-207ENST00000528414 RELL1Q8IUW5 271 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 MYO1HQ8N1T3 1032 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 STAG2Q8N3U4 1231 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 KCNH5Q8NCM2 988 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 UHMK1Q8TAS1 419 aaKnown RBP4.48□□□□□ -1.69
PTPN22-207ENST00000528414 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-207ENST00000528414 BRINP2Q9C0B6 783 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 GOPCQ9HD26 462 aa4.48□□□□□ -1.69
PTPN22-207ENST00000528414 HTATSF1O43719 755 aaKnown RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 HMMRO75330 724 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms