RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
SNRNP35-204ENST00000527158 MCAMP43121 646 aa19.4■□□□□ 0.7
SNRNP35-204ENST00000527158 CCDC129Q6ZRS4 1044 aa19.4■□□□□ 0.7
SNRNP35-204ENST00000527158 CYP46A1Q9Y6A2 500 aa19.4■□□□□ 0.7
SNRNP35-204ENST00000527158 NPHP1O15259 732 aa19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 ZSWIM6Q9HCJ5 1215 aa19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 ARID4AP29374 1257 aaPredicted RBP19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 CHRNDQ07001 517 aa19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 ADCK5Q3MIX3 580 aa19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 C3orf67Q6ZVT6 689 aa19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 NOL8Q76FK4 1167 aaKnown RBP19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 TTC14Q96N46 770 aa19.39■□□□□ 0.69
SNRNP35-204ENST00000527158 PHKA1P46020 1223 aa19.38■□□□□ 0.69
SNRNP35-204ENST00000527158 RAB3GAP1Q15042 981 aa19.38■□□□□ 0.69
SNRNP35-204ENST00000527158 BSDC1Q9NW68 430 aaPredicted RBP19.38■□□□□ 0.69
SNRNP35-204ENST00000527158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 CUL4AQ13619 759 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 TSGA10IPQ3SY00 556 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 VPS53Q5VIR6 699 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 ZSCAN25Q6NSZ9 544 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 PI16Q6UXB8 463 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 RUFY3Q7L099 469 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 PDRG1Q9NUG6 133 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 BRWD3Q6RI45 1802 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 NUCB2P80303 420 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 KRT32Q14532 448 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 INTS4Q96HW7 963 aaKnown RBP19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 DSCC1Q9BVC3 393 aa19.37■□□□□ 0.69
SNRNP35-204ENST00000527158 GOLGA6L3A6NEY3 463 aa19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 AK2P54819 239 aa19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 SLFNL1Q499Z3 407 aa19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 LIMCH1Q9UPQ0 1083 aa19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 CARMIL3Q8ND23 1372 aa19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 ZGPATQ8N5A5 531 aaKnown RBP19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 RTN4Q9NQC3 1192 aaKnown RBP19.36■□□□□ 0.69
SNRNP35-204ENST00000527158 MAST3O60307 1309 aa19.35■□□□□ 0.69
SNRNP35-204ENST00000527158 CYP2E1P05181 493 aaPredicted RBP19.35■□□□□ 0.69
SNRNP35-204ENST00000527158 TNPO1Q92973 898 aaKnown RBP19.35■□□□□ 0.69
SNRNP35-204ENST00000527158 COL24A1Q17RW2 1714 aa19.35■□□□□ 0.69
SNRNP35-204ENST00000527158 FSD2A1L4K1 749 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 SNAP23O00161 211 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 CPA1P15085 419 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 NFIXQ14938 502 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 BLOC1S2Q6QNY1 142 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 APPBP2Q92624 585 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 OSBP2Q969R2 916 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 GBP4Q96PP9 640 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 RPAP1Q9BWH6 1393 aaPredicted RBP19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 TRAK2O60296 914 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 SPATA5Q8NB90 893 aa19.34■□□□□ 0.69
SNRNP35-204ENST00000527158 M0R2C6 588 aa19.33■□□□□ 0.69
SNRNP35-204ENST00000527158 C4AP0C0L4 1744 aa19.33■□□□□ 0.69
SNRNP35-204ENST00000527158 HSPD1P10809 573 aaKnown RBP19.33■□□□□ 0.69
SNRNP35-204ENST00000527158 RPS8P62241 208 aaKnown RBP19.33■□□□□ 0.69
SNRNP35-204ENST00000527158 SKOR2Q2VWA4 1001 aaPredicted RBP19.33■□□□□ 0.69
SNRNP35-204ENST00000527158 TXNRD1Q16881 649 aa19.33■□□□□ 0.68
SNRNP35-204ENST00000527158 CELF1Q92879 486 aaKnown RBP19.33■□□□□ 0.68
SNRNP35-204ENST00000527158 MINPP1Q9UNW1 487 aa19.33■□□□□ 0.68
SNRNP35-204ENST00000527158 ARAP2Q8WZ64 1704 aa19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 UBE4AQ14139 1066 aa19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 SLC9C2Q5TAH2 1124 aa19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 CCDC24Q8N4L8 307 aa19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 CNBD1Q8NA66 436 aa19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 RXRBP28702 533 aa19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 BCAMP50895 628 aa19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 ZSCAN31Q96LW9 406 aaPredicted RBP19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
SNRNP35-204ENST00000527158 CYP21A2P08686 494 aa19.31■□□□□ 0.68
SNRNP35-204ENST00000527158 ADD2P35612 726 aa19.31■□□□□ 0.68
SNRNP35-204ENST00000527158 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
SNRNP35-204ENST00000527158 ANKRD1Q15327 319 aa19.31■□□□□ 0.68
SNRNP35-204ENST00000527158 GYS1P13807 737 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 NEK1Q96PY6 1258 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 GNL3LQ9NVN8 582 aaKnown RBP19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 CTNNA3Q9UI47 895 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 AKAP11Q9UKA4 1901 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 PROM2Q8N271 834 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 ANKRD2Q9GZV1 360 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 PUS7LQ9H0K6 701 aaKnown RBP19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 ALDH8A1Q9H2A2 487 aaPredicted RBP19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 SH2B1Q9NRF2 756 aaPredicted RBP19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 TAF6LQ9Y6J9 622 aa19.3■□□□□ 0.68
SNRNP35-204ENST00000527158 PLSCR1O15162 318 aa19.29■□□□□ 0.68
SNRNP35-204ENST00000527158 MRE11P49959 708 aa19.29■□□□□ 0.68
SNRNP35-204ENST00000527158 MAP3K12Q12852 859 aa19.29■□□□□ 0.68
SNRNP35-204ENST00000527158 CAVIN4Q5BKX8 364 aa19.29■□□□□ 0.68
SNRNP35-204ENST00000527158 LARP6Q9BRS8 491 aaKnown RBP19.29■□□□□ 0.68
SNRNP35-204ENST00000527158 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.29■□□□□ 0.68
SNRNP35-204ENST00000527158 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
SNRNP35-204ENST00000527158 COL4A1P02462 1669 aa19.28■□□□□ 0.68
SNRNP35-204ENST00000527158 APBA3O96018 575 aa19.28■□□□□ 0.68
SNRNP35-204ENST00000527158 HMGB1P09429 215 aaKnown RBP19.28■□□□□ 0.68
SNRNP35-204ENST00000527158 TM4SF1P30408 202 aa19.28■□□□□ 0.68
SNRNP35-204ENST00000527158 GPAA1O43292 621 aa19.27■□□□□ 0.68
SNRNP35-204ENST00000527158 PDE6AP16499 860 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms