RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 GRAPQ13588 217 aa10.6□□□□□ -0.71
PABPC4-220ENST00000525669 CCDC102BQ68D86 513 aa10.6□□□□□ -0.71
PABPC4-220ENST00000525669 GRAPLQ8TC17 118 aaPredicted RBP10.6□□□□□ -0.71
PABPC4-220ENST00000525669 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
PABPC4-220ENST00000525669 ANO2Q9NQ90 1003 aa10.6□□□□□ -0.71
PABPC4-220ENST00000525669 SGSM2O43147 1006 aa10.59□□□□□ -0.71
PABPC4-220ENST00000525669 REC8O95072 547 aa10.59□□□□□ -0.71
PABPC4-220ENST00000525669 KLRK1P26718 216 aa10.59□□□□□ -0.71
PABPC4-220ENST00000525669 GYG1P46976 350 aa10.59□□□□□ -0.71
PABPC4-220ENST00000525669 RBM25P49756 843 aaKnown RBP10.59□□□□□ -0.71
PABPC4-220ENST00000525669 BCAMP50895 628 aa10.59□□□□□ -0.71
PABPC4-220ENST00000525669 RBM17Q96I25 401 aaKnown RBP10.59□□□□□ -0.71
PABPC4-220ENST00000525669 IQSEC3Q9UPP2 1182 aaPredicted RBP10.59□□□□□ -0.71
PABPC4-220ENST00000525669 LTBP1Q14766 1721 aa10.58□□□□□ -0.72
PABPC4-220ENST00000525669 ARID4AP29374 1257 aaPredicted RBP10.58□□□□□ -0.72
PABPC4-220ENST00000525669 KCNJ4P48050 445 aa10.58□□□□□ -0.72
PABPC4-220ENST00000525669 CRY2Q49AN0 593 aa10.58□□□□□ -0.72
PABPC4-220ENST00000525669 CCDC129Q6ZRS4 1044 aa10.58□□□□□ -0.72
PABPC4-220ENST00000525669 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
PABPC4-220ENST00000525669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.58□□□□□ -0.72
PABPC4-220ENST00000525669 GPR101Q96P66 508 aaPredicted RBP10.58□□□□□ -0.72
PABPC4-220ENST00000525669 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.72
PABPC4-220ENST00000525669 KIF2CQ99661 725 aa10.58□□□□□ -0.72
PABPC4-220ENST00000525669 DLEC1Q9Y238 1755 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 HIP1O00291 1037 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 UQCRFS1P1P0C7P4 283 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 GPSM2P81274 684 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 PTH1RQ03431 593 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 RUFY2Q8WXA3 655 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 BRIP1Q9BX63 1249 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 ANKRD2Q9GZV1 360 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 LSG1Q9H089 658 aaKnown RBP10.57□□□□□ -0.72
PABPC4-220ENST00000525669 PIH1D3Q9NQM4 214 aaKnown RBP10.57□□□□□ -0.72
PABPC4-220ENST00000525669 HMG20BQ9P0W2 317 aa10.57□□□□□ -0.72
PABPC4-220ENST00000525669 SLX4Q8IY92 1834 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 COL1A1P02452 1464 aaPredicted RBP10.56□□□□□ -0.72
PABPC4-220ENST00000525669 KLRG2A4D1S0 409 aaPredicted RBP10.56□□□□□ -0.72
PABPC4-220ENST00000525669 EIF5BO60841 1220 aaKnown RBP10.56□□□□□ -0.72
PABPC4-220ENST00000525669 CYP2E1P05181 493 aaPredicted RBP10.56□□□□□ -0.72
PABPC4-220ENST00000525669 RASGRF1Q13972 1273 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 UBE4AQ14139 1066 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 KIAA1211Q6ZU35 1233 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 ZNF589Q86UQ0 364 aaPredicted RBP10.56□□□□□ -0.72
PABPC4-220ENST00000525669 CCDC125Q86Z20 511 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 SPATA5Q8NB90 893 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 ZNF512BQ96KM6 892 aaPredicted RBP10.56□□□□□ -0.72
PABPC4-220ENST00000525669 ANKIB1Q9P2G1 1089 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 PALD1Q9ULE6 856 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 LAMA4Q16363 1823 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 ZNF804BA4D1E1 1349 aa10.56□□□□□ -0.72
PABPC4-220ENST00000525669 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 RFX7Q2KHR2 1363 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 MED23Q9ULK4 1368 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 M0R2C6 588 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
PABPC4-220ENST00000525669 RNF113AO15541 343 aaKnown RBP10.55□□□□□ -0.72
PABPC4-220ENST00000525669 SRGNP10124 158 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 CHRNA5P30532 468 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 HOXA10P31260 410 aaPredicted RBP10.55□□□□□ -0.72
PABPC4-220ENST00000525669 PDE6BP35913 854 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 OLFM4Q6UX06 510 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 TXNRD3Q86VQ6 643 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 C2CD5Q86YS7 1000 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 FAM84BQ96KN1 310 aaPredicted RBP10.55□□□□□ -0.72
PABPC4-220ENST00000525669 CRAMP1Q96RY5 1269 aa10.55□□□□□ -0.72
PABPC4-220ENST00000525669 MAST2Q6P0Q8 1798 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 KIF13BQ9NQT8 1826 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
PABPC4-220ENST00000525669 NPR1P16066 1061 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 CAVIN4Q5BKX8 364 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 ZMYM1Q5SVZ6 1142 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 VPS37DQ86XT2 251 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 ZNF622Q969S3 477 aaKnown RBP eCLIP10.54□□□□□ -0.72
PABPC4-220ENST00000525669 KIAA1551Q9HCM1 1747 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
PABPC4-220ENST00000525669 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
PABPC4-220ENST00000525669 XDHP47989 1333 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 CCDC171Q6TFL3 1326 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 RAD50Q92878 1312 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 IRS2Q9Y4H2 1338 aa10.54□□□□□ -0.72
PABPC4-220ENST00000525669 DUOX1Q9NRD9 1551 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 BBOX1O75936 387 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 UFL1O94874 794 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 ZBTB7AO95365 584 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 CD2BP2O95400 341 aaKnown RBP10.53□□□□□ -0.72
PABPC4-220ENST00000525669 MCCP23508 829 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 WASHC4Q2M389 1173 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 FBXO33Q7Z6M2 555 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
PABPC4-220ENST00000525669 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 WWC3Q9ULE0 1092 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 JAG2Q9Y219 1238 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 ATF5Q9Y2D1 282 aaPredicted RBP10.53□□□□□ -0.72
PABPC4-220ENST00000525669 MAST3O60307 1309 aa10.53□□□□□ -0.72
PABPC4-220ENST00000525669 H0YIN7 160 aa10.52□□□□□ -0.73
PABPC4-220ENST00000525669 HIBADHP31937 336 aaKnown RBP10.52□□□□□ -0.73
PABPC4-220ENST00000525669 HSPA4P34932 840 aa10.52□□□□□ -0.73
PABPC4-220ENST00000525669 CHAF1AQ13111 956 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms