RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 GPR161Q8N6U8 529 aaKnown RBP17.15■□□□□ 0.34
LTBP3-204ENST00000525443 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
LTBP3-204ENST00000525443 CALRP27797 417 aaKnown RBP17.15■□□□□ 0.34
LTBP3-204ENST00000525443 DHX8Q14562 1220 aaKnown RBP17.15■□□□□ 0.34
LTBP3-204ENST00000525443 BORCS6Q96GS4 357 aa17.15■□□□□ 0.34
LTBP3-204ENST00000525443 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
LTBP3-204ENST00000525443 GJB2P29033 226 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 PRPF38AQ8NAV1 312 aaKnown RBP17.14■□□□□ 0.33
LTBP3-204ENST00000525443 CNNM3Q8NE01 707 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 NR1I2O75469 434 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 CLSTN2Q9H4D0 955 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 PPFIA4O75335 1185 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 TBC1D22AQ8WUA7 517 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
LTBP3-204ENST00000525443 BECN2A8MW95 431 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 MAP2K7O14733 419 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 IBSPP21815 317 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-204ENST00000525443 EIF5P55010 431 aaKnown RBP17.13■□□□□ 0.33
LTBP3-204ENST00000525443 TFIP11Q9UBB9 837 aaKnown RBP17.13■□□□□ 0.33
LTBP3-204ENST00000525443 PARP3Q9Y6F1 533 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 LARGE1O95461 756 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 AK2P54819 239 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 WWC2Q6AWC2 1192 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
LTBP3-204ENST00000525443 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-204ENST00000525443 KLHL33A6NCF5 533 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 MPHOSPH10O00566 681 aaKnown RBP17.12■□□□□ 0.33
LTBP3-204ENST00000525443 KIF3CO14782 793 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 ELF1P32519 619 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 USP8P40818 1118 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 SCRN1Q12765 414 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 PHLPP2Q6ZVD8 1323 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 KRT85P78386 507 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 IP6K1Q92551 441 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 CLIC6Q96NY7 704 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 DLG5Q8TDM6 1919 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 EXOC5O00471 708 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 N4BP2L2Q92802 583 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-204ENST00000525443 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 SUGCTQ9HAC7 445 aa17.12■□□□□ 0.33
LTBP3-204ENST00000525443 KDRP35968 1356 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 C21orf2O43822 256 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 GSDMDP57764 484 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 TRIM65Q6PJ69 517 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 RUFY3Q7L099 469 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 ERC1Q8IUD2 1116 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 LRRC59Q96AG4 307 aaKnown RBP17.11■□□□□ 0.33
LTBP3-204ENST00000525443 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
LTBP3-204ENST00000525443 PIK3C2AO00443 1686 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 GCP02774 474 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 CPA1P15085 419 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
LTBP3-204ENST00000525443 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
LTBP3-204ENST00000525443 ABCC4O15439 1325 aa17.11■□□□□ 0.33
LTBP3-204ENST00000525443 PDE1AP54750 535 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
LTBP3-204ENST00000525443 TTC41PQ6P2S7 1318 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 SSR1P43307 286 aaKnown RBP17.1■□□□□ 0.33
LTBP3-204ENST00000525443 HSPA2P54652 639 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 MSH6P52701 1360 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 CTCFLQ8NI51 663 aaPredicted RBP17.1■□□□□ 0.33
LTBP3-204ENST00000525443 BICD2Q8TD16 824 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
LTBP3-204ENST00000525443 ATF3P18847 181 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 PPP2R3AQ06190 1150 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 TMC6Q7Z403 805 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
LTBP3-204ENST00000525443 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 ANKRD44Q8N8A2 993 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 IL17REQ8NFR9 667 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 IL25Q9H293 177 aa17.09■□□□□ 0.33
LTBP3-204ENST00000525443 VEZTQ9HBM0 779 aa17.08■□□□□ 0.33
LTBP3-204ENST00000525443 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.33
LTBP3-204ENST00000525443 CRB1P82279 1406 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.32
LTBP3-204ENST00000525443 CHMLP26374 656 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 NEDD9Q14511 834 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 RSRC2Q7L4I2 434 aaKnown RBP17.08■□□□□ 0.32
LTBP3-204ENST00000525443 FAM204AQ9H8W3 233 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 CD248Q9HCU0 757 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.32
LTBP3-204ENST00000525443 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 FMN2Q9NZ56 1722 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 CCDC151A5D8V7 595 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.32
LTBP3-204ENST00000525443 ATP2B2Q01814 1243 aa17.08■□□□□ 0.32
LTBP3-204ENST00000525443 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms