RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 POLKQ9UBT6 870 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 ADCY5O95622 1261 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 GCKP35557 465 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 ARL1P40616 181 aaPredicted RBP13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 TUBB4AP04350 444 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 HLA-DOAP06340 250 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 ACTN2P35609 894 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 COPS6Q7L5N1 327 aa13.76□□□□□ -0.21
ERGIC1-208ENST00000520399 MXRA7P84157 204 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 ALS2CR12Q96Q35 445 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 CEP83Q9Y592 693 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 NPHP3Q7Z494 1330 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 CCDC160A6NGH7 325 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 RAB11FIP4Q86YS3 637 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 URI1O94763 535 aaPredicted RBP13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 WTAPQ15007 396 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 KIF4BQ2VIQ3 1234 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 KLF18A0A0U1RQI7 1052 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 CETN1Q12798 172 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 PPP2R5AQ15172 486 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 NBPF11Q86T75 865 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 BIN1O00499 593 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
ERGIC1-208ENST00000520399 IL15P40933 162 aaPredicted RBP13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 CCDC6Q16204 474 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 LRRC27Q9C0I9 530 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 TTC41PQ6P2S7 1318 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 KIF3CO14782 793 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 CEP112Q8N8E3 955 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 CPLX3Q8WVH0 158 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 CEP120Q8N960 986 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 MKRN1Q9UHC7 482 aaKnown RBP13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 SLC4A4Q9Y6R1 1079 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 A0A1W2PP64 1363 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 CAVIN2O95810 425 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 SLC39A6Q13433 755 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 ATP2B3Q16720 1220 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 CCDC102BQ68D86 513 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 BRF1Q92994 677 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
ERGIC1-208ENST00000520399 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 NSRP1Q9H0G5 558 aaKnown RBP13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 CABP5Q9NP86 173 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 MAP7D1Q3KQU3 841 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 SNX21Q969T3 373 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 COL17A1Q9UMD9 1497 aaPredicted RBP13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 SH3BP5O60239 455 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 CYP7A1P22680 504 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 PSMC4P43686 418 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 NMIQ13287 307 aaPredicted RBP13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 Q6ZUG5 572 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 TMTC2Q8N394 836 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 RMND1Q9NWS8 449 aa13.73□□□□□ -0.21
ERGIC1-208ENST00000520399 ZBTB43O43298 467 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 TDRD12Q587J7 1177 aaKnown RBP13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 SH3BGRP55822 239 aaPredicted RBP13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 IFIT1BQ5T764 474 aaKnown RBP13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 IQCGQ9H095 443 aaKnown RBP13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 A0A1W2PRG0 241 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 KIF4AO95239 1232 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 TSPY3P0CV98 308 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 TSPY8P0CW00 308 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 CA8P35219 290 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 CNPY2Q9Y2B0 182 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 STXBP4Q6ZWJ1 553 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 TTC16Q8NEE8 873 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 UTP14AQ9BVJ6 771 aaKnown RBP13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 PAG1Q9NWQ8 432 aa13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 TRMT1Q9NXH9 659 aaKnown RBP13.72□□□□□ -0.21
ERGIC1-208ENST00000520399 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 MAATS1Q7Z4T9 603 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 ALG1Q9BT22 464 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 HLTFQ14527 1009 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms