RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 EYA2O00167 538 aa13.36□□□□□ -0.27
CTNND2-215ENST00000513588 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
CTNND2-215ENST00000513588 PRC1O43663 620 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 PDILTQ8N807 584 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 MNS1Q8NEH6 495 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 BCL2L12Q9HB09 334 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 ERBB3P21860 1342 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 OTUD7BQ6GQQ9 843 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
CTNND2-215ENST00000513588 ERCC4Q92889 916 aaPredicted RBP13.35□□□□□ -0.27
CTNND2-215ENST00000513588 USP28Q96RU2 1077 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 TAF6LQ9Y6J9 622 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 RIMS1Q86UR5 1692 aaKnown RBP13.35□□□□□ -0.27
CTNND2-215ENST00000513588 E7EWF7 191 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 ZFYP08048 801 aaPredicted RBP13.35□□□□□ -0.27
CTNND2-215ENST00000513588 GSDMDP57764 484 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 KCNG4Q8TDN1 519 aa13.35□□□□□ -0.27
CTNND2-215ENST00000513588 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 PFKFB2O60825 505 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 A1BGP04217 495 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 GPTP24298 496 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 LDHAL6AQ6ZMR3 332 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 CFAP100Q494V2 611 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
CTNND2-215ENST00000513588 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 SPTLC2O15270 562 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 CCDC144CPQ8IYA2 1237 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 CCAR2Q8N163 923 aaKnown RBP13.34□□□□□ -0.27
CTNND2-215ENST00000513588 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
CTNND2-215ENST00000513588 DSCC1Q9BVC3 393 aa13.34□□□□□ -0.27
CTNND2-215ENST00000513588 FTOQ9C0B1 505 aaKnown RBP eCLIP13.34□□□□□ -0.27
CTNND2-215ENST00000513588 SART3Q15020 963 aaKnown RBP13.33□□□□□ -0.27
CTNND2-215ENST00000513588 MICU3Q86XE3 530 aa13.33□□□□□ -0.27
CTNND2-215ENST00000513588 KLHL34Q8N239 644 aa13.33□□□□□ -0.27
CTNND2-215ENST00000513588 AIDAQ96BJ3 306 aa13.33□□□□□ -0.27
CTNND2-215ENST00000513588 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
CTNND2-215ENST00000513588 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.28
CTNND2-215ENST00000513588 IL17RAQ96F46 866 aa13.33□□□□□ -0.28
CTNND2-215ENST00000513588 KAZALD1Q96I82 304 aa13.33□□□□□ -0.28
CTNND2-215ENST00000513588 KIF2AO00139 706 aaPredicted RBP13.33□□□□□ -0.28
CTNND2-215ENST00000513588 HSPD1P10809 573 aaKnown RBP13.33□□□□□ -0.28
CTNND2-215ENST00000513588 MARCKSP29966 332 aaPredicted RBP13.33□□□□□ -0.28
CTNND2-215ENST00000513588 RESTQ13127 1097 aa13.33□□□□□ -0.28
CTNND2-215ENST00000513588 TDRD7Q8NHU6 1098 aaKnown RBP13.33□□□□□ -0.28
CTNND2-215ENST00000513588 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
CTNND2-215ENST00000513588 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
CTNND2-215ENST00000513588 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 DHX8Q14562 1220 aaKnown RBP13.32□□□□□ -0.28
CTNND2-215ENST00000513588 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 NSUN7Q8NE18 718 aaKnown RBP13.32□□□□□ -0.28
CTNND2-215ENST00000513588 PGBD1Q96JS3 809 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 METAP2P50579 478 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTNND2-215ENST00000513588 TRIM22Q8IYM9 498 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 CHGBP05060 677 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 ATP2B3Q16720 1220 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 SLFNL1Q499Z3 407 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 LRRC24Q50LG9 513 aa13.32□□□□□ -0.28
CTNND2-215ENST00000513588 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
CTNND2-215ENST00000513588 CGNQ9P2M7 1197 aaKnown RBP13.32□□□□□ -0.28
CTNND2-215ENST00000513588 STARD3NLO95772 234 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTNND2-215ENST00000513588 V9GYY5 206 aaPredicted RBP13.31□□□□□ -0.28
CTNND2-215ENST00000513588 A0A087WWV3 80 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 CCP110O43303 1012 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 CBFA2T2O43439 604 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 CCDC82Q8N4S0 544 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 KCNB2Q92953 911 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 ALG1Q9BT22 464 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
CTNND2-215ENST00000513588 SYKP43405 635 aa13.31□□□□□ -0.28
CTNND2-215ENST00000513588 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
CTNND2-215ENST00000513588 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 SPTLC3Q9NUV7 552 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 ARGLU1Q9NWB6 273 aaPredicted RBP13.3□□□□□ -0.28
CTNND2-215ENST00000513588 IARSP41252 1262 aaKnown RBP13.3□□□□□ -0.28
CTNND2-215ENST00000513588 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 NAPBQ9H115 298 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 IFNKQ9P0W0 207 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.3□□□□□ -0.28
CTNND2-215ENST00000513588 GOLGA8AA7E2F4 631 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 RXRAP19793 462 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
CTNND2-215ENST00000513588 TDO2P48775 406 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 ST3GAL1Q11201 340 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
CTNND2-215ENST00000513588 CACTINQ8WUQ7 758 aaKnown RBP13.3□□□□□ -0.28
CTNND2-215ENST00000513588 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
CTNND2-215ENST00000513588 MED23Q9ULK4 1368 aa13.29□□□□□ -0.28
CTNND2-215ENST00000513588 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
CTNND2-215ENST00000513588 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTNND2-215ENST00000513588 PDIA6Q15084 440 aa13.29□□□□□ -0.28
CTNND2-215ENST00000513588 ZMYM1Q5SVZ6 1142 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms