RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 ZRANB2O95218 330 aaKnown RBP eCLIP7.85□□□□□ -1.15
CHD1-208ENST00000512392 ADH1AP07327 375 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 GNA15P30679 374 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 TERF1P54274 439 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 SQSTM1Q13501 440 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 RAB33AQ14088 237 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 KSR2Q6VAB6 950 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.85□□□□□ -1.15
CHD1-208ENST00000512392 CYP2U1Q7Z449 544 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 CFHR5Q9BXR6 569 aa7.85□□□□□ -1.15
CHD1-208ENST00000512392 RSPH9Q9H1X1 276 aaPredicted RBP7.85□□□□□ -1.15
CHD1-208ENST00000512392 FAM13AO94988 1023 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 SSBP05455 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
CHD1-208ENST00000512392 LONRF1Q17RB8 773 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 HS2ST1Q7LGA3 356 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 TRIM50Q86XT4 487 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 MYRIPQ8NFW9 859 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 TAGLN3Q9UI15 199 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 ATF3P18847 181 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 HNRNPLLQ8WVV9 542 aaKnown RBP7.84□□□□□ -1.15
CHD1-208ENST00000512392 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
CHD1-208ENST00000512392 TRIM55Q9BYV6 548 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 LRRC27Q9C0I9 530 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 TMX1Q9H3N1 280 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.84□□□□□ -1.15
CHD1-208ENST00000512392 LEMD3Q9Y2U8 911 aa7.84□□□□□ -1.15
CHD1-208ENST00000512392 GOLGA6CA6NDK9 693 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 A6NJY4 79 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 GOLGA6DP0CG33 693 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 WEE1P30291 646 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 ITGAEP38570 1179 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 TRAPPC10P48553 1259 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 HOMER1Q86YM7 354 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 FTSJ3Q8IY81 847 aaKnown RBP7.83□□□□□ -1.16
CHD1-208ENST00000512392 DRC7Q8IY82 874 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 TTC8Q8TAM2 541 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 E2F7Q96AV8 911 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 GOLGA6AQ9NYA3 693 aa7.83□□□□□ -1.16
CHD1-208ENST00000512392 PNMA6FA0A0J9YX94 578 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 ST8SIA5O15466 376 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 FZD6O60353 706 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 UPP2O95045 317 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 SRGNP10124 158 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 PTGIRP43119 386 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 RAB27AP51159 221 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 EPHB1P54762 984 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 ATP2B2Q01814 1243 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 MCL1Q07820 350 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 L1TD1Q5T7N2 865 aaKnown RBP7.82□□□□□ -1.16
CHD1-208ENST00000512392 CCDC102BQ68D86 513 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 MRPL14Q6P1L8 145 aaKnown RBP7.82□□□□□ -1.16
CHD1-208ENST00000512392 DDX42Q86XP3 938 aaKnown RBP eCLIP7.82□□□□□ -1.16
CHD1-208ENST00000512392 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 AK5Q9Y6K8 562 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 GNRH1P01148 92 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 RRM1P23921 792 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 ATP1A2P50993 1020 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 GTF2IP78347 998 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 SLC4A10Q6U841 1118 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 KRT26Q7Z3Y9 468 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 MYO1HQ8N1T3 1032 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 KDF1Q8NAX2 398 aaPredicted RBP7.82□□□□□ -1.16
CHD1-208ENST00000512392 AGBL1Q96MI9 1066 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 NIF3L1Q9GZT8 377 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 COPRSQ9NQ92 184 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 TMEM260Q9NX78 707 aa7.82□□□□□ -1.16
CHD1-208ENST00000512392 PUF60Q9UHX1 559 aaKnown RBP7.82□□□□□ -1.16
CHD1-208ENST00000512392 CCDC163A0A0D9SF12 145 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 KCNQ2O43526 872 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 VDRP11473 427 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 SCARF1Q14162 830 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 GRAMD1BQ3KR37 738 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 CCDC93Q567U6 631 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 C1QTNF12Q5T7M4 302 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 ACBD5Q5T8D3 534 aaPredicted RBP7.81□□□□□ -1.16
CHD1-208ENST00000512392 ERAP2Q6P179 960 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 CC2D1AQ6P1N0 951 aaPredicted RBP7.81□□□□□ -1.16
CHD1-208ENST00000512392 C16orf86Q6ZW13 317 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 IFNL3Q8IZI9 196 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 ATL2Q8NHH9 583 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 FAM129BQ96TA1 746 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 FEZ1Q99689 392 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 ZNF700Q9H0M5 742 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
CHD1-208ENST00000512392 TCERG1O14776 1098 aaKnown RBP7.8□□□□□ -1.16
CHD1-208ENST00000512392 SLC26A4O43511 780 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 NFX1Q12986 1120 aaKnown RBP7.8□□□□□ -1.16
CHD1-208ENST00000512392 TRIM46Q7Z4K8 759 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 SUGP1Q8IWZ8 645 aaKnown RBP7.8□□□□□ -1.16
CHD1-208ENST00000512392 LINC00528Q8N1L1 170 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 TRPM4Q8TD43 1214 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 DMRTB1Q96MA1 342 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 WASHC2CQ9Y4E1 1318 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 RELBQ01201 579 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 RASGRP4Q8TDF6 673 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 CITED4Q96RK1 184 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 ATP13A2Q9NQ11 1180 aa7.8□□□□□ -1.16
CHD1-208ENST00000512392 PPP2R3BQ9Y5P8 575 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms