RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
NEK1-203ENST00000507142 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
NEK1-203ENST00000507142 CHRNA5P30532 468 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 ZHX3Q9H4I2 956 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 USP40Q9NVE5 1235 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 REREQ9P2R6 1566 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 MED14O60244 1454 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 NLRP10Q86W26 655 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 WASF1Q92558 559 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 SH2D4AQ9H788 454 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 TNNQ9UQP3 1299 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 IQGAP1P46940 1657 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 KIF5BP33176 963 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 KIF22Q14807 665 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 ZYXQ15942 572 aaKnown RBP11.09□□□□□ -0.63
NEK1-203ENST00000507142 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 NRXN1Q9ULB1 1477 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 SEC31BQ9NQW1 1179 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 CARMIL3Q8ND23 1372 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 SETBP1Q9Y6X0 1596 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 GNAT2P19087 354 aa11.09□□□□□ -0.63
NEK1-203ENST00000507142 SMCR8Q8TEV9 937 aaPredicted RBP11.09□□□□□ -0.63
NEK1-203ENST00000507142 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
NEK1-203ENST00000507142 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEK1-203ENST00000507142 KDRP35968 1356 aa11.08□□□□□ -0.63
NEK1-203ENST00000507142 GRAPQ13588 217 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 GRAPLQ8TC17 118 aaPredicted RBP11.08□□□□□ -0.64
NEK1-203ENST00000507142 NFIXQ14938 502 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 HLFQ16534 295 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 CEP85Q6P2H3 762 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 ESR2Q92731 530 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 LEMD3Q9Y2U8 911 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 IVNS1ABPQ9Y6Y0 642 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 TNNI3KQ59H18 835 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 FPGT-TNNI3KV9GXZ4 949 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 GOLGA8AA7E2F4 631 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 GOLGA8BA8MQT2 603 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 RNF113AO15541 343 aaKnown RBP11.08□□□□□ -0.64
NEK1-203ENST00000507142 SSBP05455 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEK1-203ENST00000507142 DCAF15Q66K64 600 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
NEK1-203ENST00000507142 MBD4O95243 580 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 LINC00116Q8NCU8 138 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 MTFR1LQ9H019 292 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 OTUD7BQ6GQQ9 843 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 FNBP4Q8N3X1 1017 aaPredicted RBP11.07□□□□□ -0.64
NEK1-203ENST00000507142 DBNDD2Q9BQY9 259 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 TANGO6Q9C0B7 1094 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 QRICH2Q9H0J4 1663 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 CLRN2A0PK11 232 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 CCDC144CPQ8IYA2 1237 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 ZNF277Q9NRM2 450 aaPredicted RBP11.07□□□□□ -0.64
NEK1-203ENST00000507142 KIF13AQ9H1H9 1805 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 RABEP1Q15276 862 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 SPATA5Q8NB90 893 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 C3P01024 1663 aa11.07□□□□□ -0.64
NEK1-203ENST00000507142 PDCP20941 246 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 NCOA7Q8NI08 942 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 PCMTD1Q96MG8 357 aaPredicted RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 KRT23Q9C075 422 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 ARHGEF10LQ9HCE6 1279 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 TRMT1LQ7Z2T5 733 aaKnown RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 HMGB1P09429 215 aaKnown RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 MCM2P49736 904 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 MCMDC2Q4G0Z9 681 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 MAPKAPK5Q8IW41 473 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 B4DLN1 442 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 MRPL12P52815 198 aaKnown RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 CEBPZQ03701 1054 aaKnown RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 PDE4CQ08493 712 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 IFIT1BQ5T764 474 aaKnown RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 CCDC73Q6ZRK6 1079 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
NEK1-203ENST00000507142 TMEM87AQ8NBN3 555 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 KDM2BQ8NHM5 1336 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 NCAPD2Q15021 1401 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 MATR3P43243 847 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■■■ 28.3
NEK1-203ENST00000507142 BCAMP50895 628 aa11.06□□□□□ -0.64
NEK1-203ENST00000507142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEK1-203ENST00000507142 CEP89Q96ST8 783 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 TRAF1Q13077 416 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 DDX11Q96FC9 970 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 NLRP5P59047 1200 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 WTAPQ15007 396 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 TGFBRAP1Q8WUH2 860 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 BRIP1Q9BX63 1249 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 STK38Q15208 465 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 CERS3Q8IU89 383 aa11.05□□□□□ -0.64
NEK1-203ENST00000507142 ARMT1Q9H993 441 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms