RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 CCDC74AQ96AQ1 378 aa7.35□□□□□ -1.23
SCLT1-206ENST00000503565 TRIM11Q96F44 468 aa7.35□□□□□ -1.23
SCLT1-206ENST00000503565 GMLQ99445 158 aa7.35□□□□□ -1.23
SCLT1-206ENST00000503565 DNAJC2Q99543 621 aaKnown RBP7.35□□□□□ -1.23
SCLT1-206ENST00000503565 C12orf49Q9H741 205 aa7.35□□□□□ -1.23
SCLT1-206ENST00000503565 EFCC1Q9HA90 598 aa7.35□□□□□ -1.23
SCLT1-206ENST00000503565 RRAGCQ9HB90 399 aa7.35□□□□□ -1.23
SCLT1-206ENST00000503565 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
SCLT1-206ENST00000503565 DNAJB12Q9NXW2 375 aaKnown RBP7.35□□□□□ -1.23
SCLT1-206ENST00000503565 XYLBO75191 536 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 ITGB2P05107 769 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 PTPN12Q05209 780 aaKnown RBP7.34□□□□□ -1.23
SCLT1-206ENST00000503565 MEI1Q5TIA1 1274 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 XKR5Q6UX68 686 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 MICALL1Q8N3F8 863 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 TTC16Q8NEE8 873 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 NLRP2Q9NX02 1062 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 SLC6A14Q9UN76 642 aa7.34□□□□□ -1.23
SCLT1-206ENST00000503565 GIMAP6Q6P9H5 292 aa7.33□□□□□ -1.24
SCLT1-206ENST00000503565 LNPKQ9C0E8 428 aa7.33□□□□□ -1.24
SCLT1-206ENST00000503565 IGFLR1Q9H665 355 aa7.33□□□□□ -1.24
SCLT1-206ENST00000503565 ZFYVE28Q9HCC9 887 aa7.33□□□□□ -1.24
SCLT1-206ENST00000503565 USP31Q70CQ4 1352 aa7.33□□□□□ -1.24
SCLT1-206ENST00000503565 CADPSQ9ULU8 1353 aa7.33□□□□□ -1.24
SCLT1-206ENST00000503565 MMP20O60882 483 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 RARAP10276 462 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 ATP2B1P20020 1258 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 PLAURQ03405 335 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 TBC1D8BQ0IIM8 1120 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 NEUROD1Q13562 356 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 ILDR2Q71H61 639 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 DHX32Q7L7V1 743 aaKnown RBP7.32□□□□□ -1.24
SCLT1-206ENST00000503565 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 USP48Q86UV5 1035 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 ZNF654Q8IZM8 581 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 TRPM4Q8TD43 1214 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 SNX29Q8TEQ0 813 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 PNMA5Q96PV4 448 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 UBE2OQ9C0C9 1292 aaKnown RBP7.32□□□□□ -1.24
SCLT1-206ENST00000503565 TMEM63CQ9P1W3 806 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 MKL2Q9ULH7 1088 aa7.32□□□□□ -1.24
SCLT1-206ENST00000503565 M0R082 166 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 GIPC1O14908 333 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 GDF11O95390 407 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 HMGB1P09429 215 aaKnown RBP7.31□□□□□ -1.24
SCLT1-206ENST00000503565 ALAS2P22557 587 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 DNAJA1P31689 397 aaKnown RBP7.31□□□□□ -1.24
SCLT1-206ENST00000503565 MLLT1Q03111 559 aaPredicted RBP7.31□□□□□ -1.24
SCLT1-206ENST00000503565 PDE12Q6L8Q7 609 aaKnown RBP7.31□□□□□ -1.24
SCLT1-206ENST00000503565 KANK3Q6NY19 840 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 TMEM151AQ8N4L1 468 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 DCAF5Q96JK2 942 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
SCLT1-206ENST00000503565 CHRDQ9H2X0 955 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 ELP3Q9H9T3 547 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 PRDM6Q9NQX0 595 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 TLR7Q9NYK1 1049 aaKnown RBP7.31□□□□□ -1.24
SCLT1-206ENST00000503565 GGT7Q9UJ14 662 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 INPP5FQ9Y2H2 1132 aa7.31□□□□□ -1.24
SCLT1-206ENST00000503565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.31□□□□□ -1.24
SCLT1-206ENST00000503565 PHF20L1A8MW92 1017 aa7.3□□□□□ -1.24
SCLT1-206ENST00000503565 UBAP1LF5GYI3 381 aa7.3□□□□□ -1.24
SCLT1-206ENST00000503565 RNF225M0QZC1 329 aaPredicted RBP7.3□□□□□ -1.24
SCLT1-206ENST00000503565 POLR3DP05423 398 aaPredicted RBP7.3□□□□□ -1.24
SCLT1-206ENST00000503565 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
SCLT1-206ENST00000503565 GNL2Q13823 731 aaKnown RBP7.3□□□□□ -1.24
SCLT1-206ENST00000503565 TAF1CQ15572 869 aaPredicted RBP7.3□□□□□ -1.24
SCLT1-206ENST00000503565 HS2ST1Q7LGA3 356 aa7.3□□□□□ -1.24
SCLT1-206ENST00000503565 PODNQ7Z5L7 613 aa7.3□□□□□ -1.24
SCLT1-206ENST00000503565 ARMC5Q96C12 935 aa7.3□□□□□ -1.24
SCLT1-206ENST00000503565 NPHS2Q9NP85 383 aa7.3□□□□□ -1.24
SCLT1-206ENST00000503565 KRBA1A5PL33 1030 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 GNB5O14775 395 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 PHACTR2O75167 634 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 NID1P14543 1247 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 ST13P50502 369 aaKnown RBP7.29□□□□□ -1.24
SCLT1-206ENST00000503565 ARID5AQ03989 594 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 GRIK5Q16478 980 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 COL13A1Q5TAT6 717 aaPredicted RBP7.29□□□□□ -1.24
SCLT1-206ENST00000503565 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 HFE2Q6ZVN8 426 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 NLRP13Q86W25 1043 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 LPIN3Q9BQK8 851 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 FAM8A1Q9UBU6 413 aa7.29□□□□□ -1.24
SCLT1-206ENST00000503565 FNDC3AQ9Y2H6 1198 aaKnown RBP7.29□□□□□ -1.24
SCLT1-206ENST00000503565 J3QW42 95 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 HOXD8P13378 290 aaPredicted RBP7.28□□□□□ -1.24
SCLT1-206ENST00000503565 CANXP27824 592 aaKnown RBP7.28□□□□□ -1.24
SCLT1-206ENST00000503565 NRLP54845 237 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 GPLD1P80108 840 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 PSAPL1Q6NUJ1 521 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 ERMP1Q7Z2K6 904 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 MCF2L2Q86YR7 1114 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 NUDT8Q8WV74 236 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 BCO2Q9BYV7 579 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 COPRSQ9NQ92 184 aa7.28□□□□□ -1.24
SCLT1-206ENST00000503565 CNTN3Q9P232 1028 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms