RNA–Protein interactions for RNA: ENST00000503414.5

SPARCL1-205, Transcript of SPARC like 1, humanhuman

TSL 2 BASIC

Gene SPARCL1, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-205ENST00000503414 SYNPO2Q9UMS6 1093 aa8.69□□□□□ -1.02
SPARCL1-205ENST00000503414 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
SPARCL1-205ENST00000503414 DCCP43146 1447 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 ECEL1O95672 775 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 CCDC183Q5T5S1 534 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 TCP11L2Q8N4U5 519 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 ZCRB1Q8TBF4 217 aaKnown RBP8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 C17orf50Q8WW18 174 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 PLEKHG4BQ96PX9 1271 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 MAP2P11137 1827 aaKnown RBP8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 AATKQ6ZMQ8 1374 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 AP1G2O75843 785 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 PAX3P23760 479 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 SLC8A3P57103 927 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 SFSWAPQ12872 951 aaKnown RBP8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 TMED1Q13445 227 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 RCSD1Q6JBY9 416 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 SDCCAG8Q86SQ7 713 aaPredicted RBP8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 BATF3Q9NR55 127 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 EXOC6BQ9Y2D4 811 aa8.68□□□□□ -1.02
SPARCL1-205ENST00000503414 NPHP3Q7Z494 1330 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 LTBP4Q8N2S1 1624 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 KDRP35968 1356 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 SHPRHQ149N8 1683 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 OATP04181 439 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 CASTP20810 708 aaKnown RBP8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 CHRNA2Q15822 529 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 ZNF280DQ6N043 979 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 MYLK4Q86YV6 388 aaPredicted RBP8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 USHBP1Q8N6Y0 703 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 ATL2Q8NHH9 583 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 MIPOL1Q8TD10 442 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 SAAL1Q96ER3 474 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 AGAP3Q96P47 875 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 PLEKHF1Q96S99 279 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 L2HGDHQ9H9P8 463 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 FOXD4L1Q9NU39 408 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 AKAP2Q9Y2D5 859 aa8.67□□□□□ -1.02
SPARCL1-205ENST00000503414 HOXC9P31274 260 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 PRKAR2BP31323 418 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 CCDC178Q5BJE1 867 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 CPLX2Q6PUV4 134 aaKnown RBP8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 NBPF15Q8N660 670 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 KCND1Q9NSA2 647 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 CWC25Q9NXE8 425 aaPredicted RBP8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 SYNRGQ9UMZ2 1314 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 RBM47A0AV96 593 aaKnown RBP8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 EPB41L2O43491 1005 aaKnown RBP8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 RAB27AP51159 221 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 DBN1Q16643 649 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 ARHGAP29Q52LW3 1261 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 WLSQ5T9L3 541 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 SULT6B1Q6IMI4 303 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 NYAP1Q6ZVC0 841 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 IQCA1Q86XH1 822 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 RMDN2Q96LZ7 410 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 ANKRD26Q9UPS8 1709 aa8.66□□□□□ -1.02
SPARCL1-205ENST00000503414 H7C1W4 665 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 PEX19P40855 299 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 CCDC158Q5M9N0 1113 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 PRPF38AQ8NAV1 312 aaKnown RBP8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 UBXN4Q92575 508 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 SLX1AQ9BQ83 275 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 UTP6Q9NYH9 597 aaKnown RBP8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 SPATA31A3Q5VYP0 1347 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 MARF1Q9Y4F3 1742 aaKnown RBP8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 PXDNQ92626 1479 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 RTN3O95197 1032 aaPredicted RBP8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 CLNS1AP54105 237 aaKnown RBP8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 SLFN5Q08AF3 891 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 SPATA21Q7Z572 469 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 TDRD7Q8NHU6 1098 aaKnown RBP8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 EYA1Q99502 592 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 ARPC5LQ9BPX5 153 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 FRMD4BQ9Y2L6 1034 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 ZNF521Q96K83 1311 aa8.65□□□□□ -1.02
SPARCL1-205ENST00000503414 PTGS1P23219 599 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 MFSD4BQ5TF39 518 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 KCNV1Q6PIU1 500 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 TRMT2AQ8IZ69 625 aaKnown RBP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 HELBQ8NG08 1087 aaPredicted RBP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 CXorf38Q8TB03 319 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 RUNDC1Q96C34 613 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 MRFAP1L1Q96HT8 127 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 ERBB3P21860 1342 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 ZSCAN9O15535 394 aaPredicted RBP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 ACBD5Q5T8D3 534 aaPredicted RBP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 CWC27Q6UX04 472 aaKnown RBP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 ARHGEF25Q86VW2 580 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 CCDC50Q8IVM0 306 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 TRIM7Q9C029 511 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 ARFGAP3Q9NP61 516 aa8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 ORC3Q9UBD5 711 aaPredicted RBP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
SPARCL1-205ENST00000503414 CDR1P51861 262 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms