RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
TNPO1-202ENST00000503084 LRP10Q7Z4F1 713 aa15.19■□□□□ 0.02
TNPO1-202ENST00000503084 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
TNPO1-202ENST00000503084 THUMPD2Q9BTF0 503 aaKnown RBP15.19■□□□□ 0.02
TNPO1-202ENST00000503084 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
TNPO1-202ENST00000503084 MTFR1Q15390 333 aa15.18■□□□□ 0.02
TNPO1-202ENST00000503084 TAF7Q15545 349 aaPredicted RBP15.18■□□□□ 0.02
TNPO1-202ENST00000503084 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
TNPO1-202ENST00000503084 GPR153Q6NV75 609 aa15.18■□□□□ 0.02
TNPO1-202ENST00000503084 MTMR10Q9NXD2 777 aa15.18■□□□□ 0.02
TNPO1-202ENST00000503084 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
TNPO1-202ENST00000503084 ARHGEF6Q15052 776 aa15.17■□□□□ 0.02
TNPO1-202ENST00000503084 APOBEC3FQ8IUX4 373 aaKnown RBP15.17■□□□□ 0.02
TNPO1-202ENST00000503084 MXD3Q9BW11 206 aa15.17■□□□□ 0.02
TNPO1-202ENST00000503084 COL1A1P02452 1464 aaPredicted RBP15.16■□□□□ 0.02
TNPO1-202ENST00000503084 USP17L3A6NCW0 530 aa15.16■□□□□ 0.02
TNPO1-202ENST00000503084 USP17L4A6NCW7 530 aa15.16■□□□□ 0.02
TNPO1-202ENST00000503084 EIF4A1P60842 406 aaKnown RBP15.16■□□□□ 0.02
TNPO1-202ENST00000503084 MAP3K11Q16584 847 aa15.16■□□□□ 0.02
TNPO1-202ENST00000503084 USP17L1Q7RTZ2 530 aa15.16■□□□□ 0.02
TNPO1-202ENST00000503084 ARHGAP39Q9C0H5 1083 aa15.16■□□□□ 0.02
TNPO1-202ENST00000503084 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
TNPO1-202ENST00000503084 PRUNE2Q8WUY3 3088 aa15.15■□□□□ 0.02
TNPO1-202ENST00000503084 TESPA1A2RU30 521 aaPredicted RBP15.15■□□□□ 0.02
TNPO1-202ENST00000503084 ANXA1P04083 346 aa15.15■□□□□ 0.02
TNPO1-202ENST00000503084 PROSER3Q2NL68 480 aa15.15■□□□□ 0.02
TNPO1-202ENST00000503084 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
TNPO1-202ENST00000503084 MUC3AQ02505 3323 aa15.15■□□□□ 0.02
TNPO1-202ENST00000503084 OTOFQ9HC10 1997 aa15.15■□□□□ 0.02
TNPO1-202ENST00000503084 FARP2O94887 1054 aaPredicted RBP15.14■□□□□ 0.01
TNPO1-202ENST00000503084 PDIA6Q15084 440 aa15.14■□□□□ 0.01
TNPO1-202ENST00000503084 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
TNPO1-202ENST00000503084 HSP90AB3PQ58FF7 597 aa15.14■□□□□ 0.01
TNPO1-202ENST00000503084 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
TNPO1-202ENST00000503084 GJA8P48165 433 aa15.13■□□□□ 0.01
TNPO1-202ENST00000503084 TAF1CQ15572 869 aaPredicted RBP15.13■□□□□ 0.01
TNPO1-202ENST00000503084 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
TNPO1-202ENST00000503084 OGFOD1Q8N543 542 aa15.13■□□□□ 0.01
TNPO1-202ENST00000503084 NKX2-3Q8TAU0 364 aa15.13■□□□□ 0.01
TNPO1-202ENST00000503084 HTATSF1O43719 755 aaKnown RBP15.12■□□□□ 0.01
TNPO1-202ENST00000503084 EVI5O60447 810 aa15.12■□□□□ 0.01
TNPO1-202ENST00000503084 RPS8P62241 208 aaKnown RBP15.12■□□□□ 0.01
TNPO1-202ENST00000503084 DACT2Q5SW24 774 aa15.12■□□□□ 0.01
TNPO1-202ENST00000503084 LAMA2P24043 3122 aaKnown RBP15.12■□□□□ 0.01
TNPO1-202ENST00000503084 PPP1R12BO60237 982 aaPredicted RBP15.11■□□□□ 0.01
TNPO1-202ENST00000503084 GJB1P08034 283 aa15.11■□□□□ 0.01
TNPO1-202ENST00000503084 COL9A1P20849 921 aa15.11■□□□□ 0.01
TNPO1-202ENST00000503084 BRI3BPQ8WY22 251 aa15.11■□□□□ 0.01
TNPO1-202ENST00000503084 DEFB129Q9H1M3 183 aa15.11■□□□□ 0.01
TNPO1-202ENST00000503084 ZFYVE28Q9HCC9 887 aa15.11■□□□□ 0.01
TNPO1-202ENST00000503084 ALPK3Q96L96 1907 aa15.11■□□□□ 0.01
TNPO1-202ENST00000503084 HSPA5P11021 654 aaKnown RBP15.1■□□□□ 0.01
TNPO1-202ENST00000503084 CCL5P13501 91 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 LACTBP83111 547 aaPredicted RBP15.1■□□□□ 0.01
TNPO1-202ENST00000503084 PODNQ7Z5L7 613 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 PNISRQ8TF01 805 aaKnown RBP15.1■□□□□ 0.01
TNPO1-202ENST00000503084 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 FAM89AQ96GI7 184 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 GDF15Q99988 308 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 RPTORQ8N122 1335 aa15.1■□□□□ 0.01
TNPO1-202ENST00000503084 FAM43AQ8N2R8 423 aa15.09■□□□□ 0.01
TNPO1-202ENST00000503084 OPTNQ96CV9 577 aa15.09■□□□□ 0.01
TNPO1-202ENST00000503084 ZBED3Q96IU2 234 aaPredicted RBP15.09■□□□□ 0.01
TNPO1-202ENST00000503084 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
TNPO1-202ENST00000503084 RAPGEFL1Q9UHV5 662 aa15.09■□□□□ 0.01
TNPO1-202ENST00000503084 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
TNPO1-202ENST00000503084 UNCXA6NJT0 531 aa15.08■□□□□ 0
TNPO1-202ENST00000503084 ECM2O94769 699 aaPredicted RBP15.08■□□□□ 0
TNPO1-202ENST00000503084 BMP8BP34820 402 aa15.08■□□□□ 0
TNPO1-202ENST00000503084 BCAMP50895 628 aa15.08■□□□□ 0
TNPO1-202ENST00000503084 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0
TNPO1-202ENST00000503084 LRIT3Q3SXY7 679 aa15.08■□□□□ 0
TNPO1-202ENST00000503084 COPS6Q7L5N1 327 aa15.08■□□□□ 0
TNPO1-202ENST00000503084 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
TNPO1-202ENST00000503084 CCL15-CCL14A0A0B4J2E2 113 aa15.07■□□□□ 0
TNPO1-202ENST00000503084 EIF2S2P20042 333 aaKnown RBP15.07■□□□□ 0
TNPO1-202ENST00000503084 IREB2P48200 963 aaKnown RBP15.07■□□□□ 0
TNPO1-202ENST00000503084 KIF22Q14807 665 aa15.07■□□□□ 0
TNPO1-202ENST00000503084 CCL15Q16663 113 aa15.07■□□□□ 0
TNPO1-202ENST00000503084 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
TNPO1-202ENST00000503084 U2AF1L4Q8WU68 220 aaKnown RBP15.07■□□□□ 0
TNPO1-202ENST00000503084 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
TNPO1-202ENST00000503084 RNF208Q9H0X6 261 aa15.07■□□□□ 0
TNPO1-202ENST00000503084 ELP3Q9H9T3 547 aa15.07■□□□□ 0
TNPO1-202ENST00000503084 XDHP47989 1333 aa15.07■□□□□ 0
TNPO1-202ENST00000503084 DLG5Q8TDM6 1919 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 GNRH1P01148 92 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 GRK4P32298 578 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 PRMT2P55345 433 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 KIAA0825Q8IV33 1275 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 ANKRD13AQ8IZ07 590 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 GUCD1Q96NT3 240 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 RIPOR2Q9Y4F9 1068 aa15.06■□□□□ 0
TNPO1-202ENST00000503084 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ -0
TNPO1-202ENST00000503084 CTGFP29279 349 aa15.05■□□□□ -0
TNPO1-202ENST00000503084 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
TNPO1-202ENST00000503084 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ -0
TNPO1-202ENST00000503084 NBPF12Q5TAG4 269 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms