RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 USP17L3A6NCW0 530 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 USP17L4A6NCW7 530 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 PPP1R12BO60237 982 aaPredicted RBP6.63□□□□□ -1.35
HTT-202ENST00000502820 TAF7Q15545 349 aaPredicted RBP6.63□□□□□ -1.35
HTT-202ENST00000502820 TAF1CQ15572 869 aaPredicted RBP6.63□□□□□ -1.35
HTT-202ENST00000502820 USP17L1Q7RTZ2 530 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 AGBL3Q8NEM8 1001 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 RAET1EQ8TD07 263 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 WNK4Q96J92 1243 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 CFAP53Q96M91 514 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 CFHR5Q9BXR6 569 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 ARHGAP39Q9C0H5 1083 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 RNF208Q9H0X6 261 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 ZFYVE28Q9HCC9 887 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 GGA1Q9UJY5 639 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 ZMYND8Q9ULU4 1186 aaPredicted RBP6.63□□□□□ -1.35
HTT-202ENST00000502820 A0A0C4DFX4 3053 aa6.63□□□□□ -1.35
HTT-202ENST00000502820 AKAP11Q9UKA4 1901 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 ZBED9Q6R2W3 1325 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 SH3TC1Q8TE82 1336 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 IRS2Q9Y4H2 1338 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 ZBTB7BO15156 539 aaPredicted RBP6.62□□□□□ -1.35
HTT-202ENST00000502820 WDHD1O75717 1129 aaPredicted RBP6.62□□□□□ -1.35
HTT-202ENST00000502820 TFRCP02786 760 aaKnown RBP6.62□□□□□ -1.35
HTT-202ENST00000502820 SYN1P17600 705 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 ZNF280AP59817 542 aaPredicted RBP6.62□□□□□ -1.35
HTT-202ENST00000502820 GLIPR1L2Q4G1C9 344 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 SLC10A5Q5PT55 438 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 TMC4Q7Z404 712 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 FAM89AQ96GI7 184 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 IPO9Q96P70 1041 aaKnown RBP6.62□□□□□ -1.35
HTT-202ENST00000502820 ELP3Q9H9T3 547 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 VEZTQ9HBM0 779 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 TAOK2Q9UL54 1235 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 BRCA2P51587 3418 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 PAPPA2Q9BXP8 1791 aa6.62□□□□□ -1.35
HTT-202ENST00000502820 CENPFP49454 3210 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 TMEM265A0A087WTH1 108 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 CLRN2A0PK11 232 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 F8W031 263 aaPredicted RBP6.61□□□□□ -1.35
HTT-202ENST00000502820 WNT10BO00744 389 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 FARP2O94887 1054 aaPredicted RBP6.61□□□□□ -1.35
HTT-202ENST00000502820 FMNL1O95466 1100 aaPredicted RBP6.61□□□□□ -1.35
HTT-202ENST00000502820 U2AF1L5P0DN76 240 aaPredicted RBP6.61□□□□□ -1.35
HTT-202ENST00000502820 ZBTB48P10074 688 aaPredicted RBP6.61□□□□□ -1.35
HTT-202ENST00000502820 CCL5P13501 91 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 BCAMP50895 628 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 U2AF1Q01081 240 aaKnown RBP eCLIP6.61□□□□□ -1.35
HTT-202ENST00000502820 NLRP10Q86W26 655 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 APOBEC3FQ8IUX4 373 aaKnown RBP6.61□□□□□ -1.35
HTT-202ENST00000502820 KIAA0825Q8IV33 1275 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 C7orf61Q8IZ16 206 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 NKX2-3Q8TAU0 364 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 OPTNQ96CV9 577 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 SHISA4Q96DD7 197 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 PTPN18Q99952 460 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 DEFB129Q9H1M3 183 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 NUDCQ9Y266 331 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 COL6A3P12111 3177 aa6.61□□□□□ -1.35
HTT-202ENST00000502820 ZNF609O15014 1411 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 CCL15-CCL14A0A0B4J2E2 113 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 IREB2P48200 963 aaKnown RBP6.6□□□□□ -1.35
HTT-202ENST00000502820 RBM5P52756 815 aaKnown RBP eCLIP6.6□□□□□ -1.35
HTT-202ENST00000502820 RPS8P62241 208 aaKnown RBP6.6□□□□□ -1.35
HTT-202ENST00000502820 CCL15Q16663 113 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 COPS6Q7L5N1 327 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 FAM122AQ96E09 287 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 MTMR10Q9NXD2 777 aa6.6□□□□□ -1.35
HTT-202ENST00000502820 UBR2Q8IWV8 1755 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 IBTKQ9P2D0 1353 aaPredicted RBP6.59□□□□□ -1.35
HTT-202ENST00000502820 A0A1W2PPC1 479 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 NEFMP07197 916 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 GRK4P32298 578 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 GJA5P36382 358 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 UBXN2AP68543 259 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 DLGAP5Q15398 846 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 HSP90AB3PQ58FF7 597 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 PODNQ7Z5L7 613 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 XAGE3Q8WTP9 111 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 U2AF1L4Q8WU68 220 aaKnown RBP6.59□□□□□ -1.35
HTT-202ENST00000502820 CNKSR2Q8WXI2 1034 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 TRIM47Q96LD4 638 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 PLEKHF1Q96S99 279 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 UBE2OQ9C0C9 1292 aaKnown RBP6.59□□□□□ -1.35
HTT-202ENST00000502820 PRO3102Q9H379 93 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 SEC31BQ9NQW1 1179 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 ZBTB47Q9UFB7 747 aaPredicted RBP6.59□□□□□ -1.35
HTT-202ENST00000502820 RIPOR2Q9Y4F9 1068 aa6.59□□□□□ -1.35
HTT-202ENST00000502820 RPTORQ8N122 1335 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 HTATSF1O43719 755 aaKnown RBP6.58□□□□□ -1.36
HTT-202ENST00000502820 HOXD10P28358 340 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 PSMC4P43686 418 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 GJA8P48165 433 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 EIF4A1P60842 406 aaKnown RBP6.58□□□□□ -1.36
HTT-202ENST00000502820 LACTBP83111 547 aaPredicted RBP6.58□□□□□ -1.36
HTT-202ENST00000502820 CACNB1Q02641 598 aaPredicted RBP6.58□□□□□ -1.36
HTT-202ENST00000502820 PROSER3Q2NL68 480 aa6.58□□□□□ -1.36
HTT-202ENST00000502820 SUPT20HL1Q3ZLR7 823 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms