RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 RPAP1Q9BWH6 1393 aaPredicted RBP18.94■□□□□ 0.62
RPN1-207ENST00000497289 PSMA5P28066 241 aa18.94■□□□□ 0.62
RPN1-207ENST00000497289 MCAMP43121 646 aa18.94■□□□□ 0.62
RPN1-207ENST00000497289 RBM6P78332 1123 aaKnown RBP18.94■□□□□ 0.62
RPN1-207ENST00000497289 CUL4AQ13619 759 aa18.94■□□□□ 0.62
RPN1-207ENST00000497289 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
RPN1-207ENST00000497289 ANKRD18AQ8IVF6 992 aa18.94■□□□□ 0.62
RPN1-207ENST00000497289 ZSWIM6Q9HCJ5 1215 aa18.94■□□□□ 0.62
RPN1-207ENST00000497289 TTF1Q15361 905 aaPredicted RBP18.93■□□□□ 0.62
RPN1-207ENST00000497289 ADCK5Q3MIX3 580 aa18.93■□□□□ 0.62
RPN1-207ENST00000497289 TPTE2Q6XPS3 522 aa18.93■□□□□ 0.62
RPN1-207ENST00000497289 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
RPN1-207ENST00000497289 CYP46A1Q9Y6A2 500 aa18.93■□□□□ 0.62
RPN1-207ENST00000497289 TNRC6CQ9HCJ0 1690 aaKnown RBP18.93■□□□□ 0.62
RPN1-207ENST00000497289 MAST3O60307 1309 aa18.93■□□□□ 0.62
RPN1-207ENST00000497289 TRIM37O94972 964 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 C3orf67Q6ZVT6 689 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 LAMA4Q16363 1823 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 PHKA1P46020 1223 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 AK2P54819 239 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 CHRNDQ07001 517 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 VPS53Q5VIR6 699 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 NLRP3Q96P20 1036 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 DSCC1Q9BVC3 393 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.92■□□□□ 0.62
RPN1-207ENST00000497289 CARMIL3Q8ND23 1372 aa18.92■□□□□ 0.62
RPN1-207ENST00000497289 HMGB2P26583 209 aaKnown RBP18.91■□□□□ 0.62
RPN1-207ENST00000497289 NUCB2P80303 420 aa18.91■□□□□ 0.62
RPN1-207ENST00000497289 TSGA10IPQ3SY00 556 aa18.91■□□□□ 0.62
RPN1-207ENST00000497289 ZSCAN25Q6NSZ9 544 aa18.91■□□□□ 0.62
RPN1-207ENST00000497289 PI16Q6UXB8 463 aa18.91■□□□□ 0.62
RPN1-207ENST00000497289 RUFY3Q7L099 469 aa18.91■□□□□ 0.62
RPN1-207ENST00000497289 INTS4Q96HW7 963 aaKnown RBP18.91■□□□□ 0.62
RPN1-207ENST00000497289 KRT32Q14532 448 aa18.91■□□□□ 0.62
RPN1-207ENST00000497289 ZGPATQ8N5A5 531 aaKnown RBP18.91■□□□□ 0.62
RPN1-207ENST00000497289 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
RPN1-207ENST00000497289 PDRG1Q9NUG6 133 aa18.91■□□□□ 0.62
RPN1-207ENST00000497289 SLFNL1Q499Z3 407 aa18.9■□□□□ 0.62
RPN1-207ENST00000497289 BSDC1Q9NW68 430 aaPredicted RBP18.9■□□□□ 0.62
RPN1-207ENST00000497289 LIMCH1Q9UPQ0 1083 aa18.89■□□□□ 0.62
RPN1-207ENST00000497289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.89■□□□□ 0.61
RPN1-207ENST00000497289 M0R2C6 588 aa18.89■□□□□ 0.61
RPN1-207ENST00000497289 CPA1P15085 419 aa18.89■□□□□ 0.61
RPN1-207ENST00000497289 MCM4P33991 863 aa18.89■□□□□ 0.61
RPN1-207ENST00000497289 WASHC4Q2M389 1173 aa18.89■□□□□ 0.61
RPN1-207ENST00000497289 APPBP2Q92624 585 aa18.89■□□□□ 0.61
RPN1-207ENST00000497289 GBP4Q96PP9 640 aa18.89■□□□□ 0.61
RPN1-207ENST00000497289 NPHP1O15259 732 aa18.88■□□□□ 0.61
RPN1-207ENST00000497289 CYP2E1P05181 493 aaPredicted RBP18.88■□□□□ 0.61
RPN1-207ENST00000497289 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
RPN1-207ENST00000497289 MYH13Q9UKX3 1938 aa18.88■□□□□ 0.61
RPN1-207ENST00000497289 OSBP2Q969R2 916 aa18.88■□□□□ 0.61
RPN1-207ENST00000497289 NFIXQ14938 502 aa18.87■□□□□ 0.61
RPN1-207ENST00000497289 SPATA5Q8NB90 893 aa18.87■□□□□ 0.61
RPN1-207ENST00000497289 HSPD1P10809 573 aaKnown RBP18.86■□□□□ 0.61
RPN1-207ENST00000497289 CELF1Q92879 486 aaKnown RBP18.86■□□□□ 0.61
RPN1-207ENST00000497289 ZSCAN31Q96LW9 406 aaPredicted RBP18.86■□□□□ 0.61
RPN1-207ENST00000497289 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
RPN1-207ENST00000497289 DDX11L8A8MPP1 907 aa18.86■□□□□ 0.61
RPN1-207ENST00000497289 SNAP23O00161 211 aa18.86■□□□□ 0.61
RPN1-207ENST00000497289 RPS6KB1P23443 525 aa18.86■□□□□ 0.61
RPN1-207ENST00000497289 ADD2P35612 726 aa18.86■□□□□ 0.61
RPN1-207ENST00000497289 CYP21A2P08686 494 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 RASGRF1Q13972 1273 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 UBE4AQ14139 1066 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 TXNRD1Q16881 649 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 ALDH8A1Q9H2A2 487 aaPredicted RBP18.85■□□□□ 0.61
RPN1-207ENST00000497289 TAF6LQ9Y6J9 622 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 ANKRD1Q15327 319 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 UBE3CQ15386 1083 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 CNBD1Q8NA66 436 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
RPN1-207ENST00000497289 MINPP1Q9UNW1 487 aa18.85■□□□□ 0.61
RPN1-207ENST00000497289 IDH1O75874 414 aaKnown RBP18.84■□□□□ 0.61
RPN1-207ENST00000497289 RPS8P62241 208 aaKnown RBP18.84■□□□□ 0.61
RPN1-207ENST00000497289 SLC9C2Q5TAH2 1124 aa18.84■□□□□ 0.61
RPN1-207ENST00000497289 NEK1Q96PY6 1258 aa18.84■□□□□ 0.61
RPN1-207ENST00000497289 TNS1Q9HBL0 1735 aaKnown RBP18.83■□□□□ 0.61
RPN1-207ENST00000497289 RGPD3A6NKT7 1758 aaPredicted RBP18.83■□□□□ 0.61
RPN1-207ENST00000497289 RGPD4Q7Z3J3 1758 aa18.83■□□□□ 0.61
RPN1-207ENST00000497289 BCAMP50895 628 aa18.83■□□□□ 0.61
RPN1-207ENST00000497289 CCDC24Q8N4L8 307 aa18.83■□□□□ 0.61
RPN1-207ENST00000497289 GYS1P13807 737 aa18.83■□□□□ 0.6
RPN1-207ENST00000497289 CLEC17AQ6ZS10 378 aa18.83■□□□□ 0.6
RPN1-207ENST00000497289 PUS7LQ9H0K6 701 aaKnown RBP18.83■□□□□ 0.6
RPN1-207ENST00000497289 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.6
RPN1-207ENST00000497289 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.83■□□□□ 0.6
RPN1-207ENST00000497289 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
RPN1-207ENST00000497289 GNL3LQ9NVN8 582 aaKnown RBP18.82■□□□□ 0.6
RPN1-207ENST00000497289 ZNF804BA4D1E1 1349 aa18.82■□□□□ 0.6
RPN1-207ENST00000497289 EP400Q96L91 3159 aa18.82■□□□□ 0.6
RPN1-207ENST00000497289 GPAA1O43292 621 aa18.82■□□□□ 0.6
RPN1-207ENST00000497289 HMGB1P09429 215 aaKnown RBP18.82■□□□□ 0.6
RPN1-207ENST00000497289 PDE6AP16499 860 aa18.82■□□□□ 0.6
RPN1-207ENST00000497289 PTMSP20962 102 aa18.82■□□□□ 0.6
RPN1-207ENST00000497289 MAP3K12Q12852 859 aa18.82■□□□□ 0.6
RPN1-207ENST00000497289 ZNF532Q9HCE3 1301 aa18.81■□□□□ 0.6
RPN1-207ENST00000497289 RXRBP28702 533 aa18.81■□□□□ 0.6
RPN1-207ENST00000497289 PKP1Q13835 747 aa18.81■□□□□ 0.6
RPN1-207ENST00000497289 LARP6Q9BRS8 491 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms