RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 PRO3102Q9H379 93 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 SH3TC1Q8TE82 1336 aa9.04□□□□□ -0.96
FN1-225ENST00000494446 UFL1O94874 794 aa9.03□□□□□ -0.96
FN1-225ENST00000494446 ARHGEF6Q15052 776 aa9.03□□□□□ -0.96
FN1-225ENST00000494446 WNK4Q96J92 1243 aa9.03□□□□□ -0.96
FN1-225ENST00000494446 CLMNQ96JQ2 1002 aa9.03□□□□□ -0.96
FN1-225ENST00000494446 GMLQ99445 158 aa9.03□□□□□ -0.96
FN1-225ENST00000494446 NR2E3Q9Y5X4 410 aa9.03□□□□□ -0.96
FN1-225ENST00000494446 SPEF2Q9C093 1822 aa9.03□□□□□ -0.96
FN1-225ENST00000494446 ALPK3Q96L96 1907 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 USP17L3A6NCW0 530 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 USP17L4A6NCW7 530 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 MYCNP04198 464 aaPredicted RBP9.02□□□□□ -0.97
FN1-225ENST00000494446 ZBTB48P10074 688 aaPredicted RBP9.02□□□□□ -0.97
FN1-225ENST00000494446 HSPA5P11021 654 aaKnown RBP9.02□□□□□ -0.97
FN1-225ENST00000494446 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
FN1-225ENST00000494446 USP17L1Q7RTZ2 530 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 DEFB123Q8N688 67 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 HTATIP2Q9BUP3 242 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 LAMA3Q16787 3333 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 OTOFQ9HC10 1997 aa9.02□□□□□ -0.97
FN1-225ENST00000494446 A0A1W2PPC1 479 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 WNT10BO00744 389 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 ZBTB7BO15156 539 aaPredicted RBP9.01□□□□□ -0.97
FN1-225ENST00000494446 HTATSF1O43719 755 aaKnown RBP9.01□□□□□ -0.97
FN1-225ENST00000494446 SASH1O94885 1247 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 ANXA1P04083 346 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 EIF2S2P20042 333 aaKnown RBP9.01□□□□□ -0.97
FN1-225ENST00000494446 EIF4G2P78344 907 aaKnown RBP eCLIP9.01□□□□□ -0.97
FN1-225ENST00000494446 AIMP1Q12904 312 aaKnown RBP9.01□□□□□ -0.97
FN1-225ENST00000494446 HSP90AB3PQ58FF7 597 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 OGFOD1Q8N543 542 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 FBXW7Q969H0 707 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 MXD3Q9BW11 206 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 GGA1Q9UJY5 639 aa9.01□□□□□ -0.97
FN1-225ENST00000494446 RPS8P62241 208 aaKnown RBP9□□□□□ -0.97
FN1-225ENST00000494446 Q7L0L9 218 aa9□□□□□ -0.97
FN1-225ENST00000494446 APOBEC3FQ8IUX4 373 aaKnown RBP9□□□□□ -0.97
FN1-225ENST00000494446 PNISRQ8TF01 805 aaKnown RBP9□□□□□ -0.97
FN1-225ENST00000494446 SHISA4Q96DD7 197 aa9□□□□□ -0.97
FN1-225ENST00000494446 PTPN18Q99952 460 aa9□□□□□ -0.97
FN1-225ENST00000494446 STAP2Q9UGK3 403 aa9□□□□□ -0.97
FN1-225ENST00000494446 STXBP5LQ9Y2K9 1186 aa9□□□□□ -0.97
FN1-225ENST00000494446 ERBB4Q15303 1308 aa9□□□□□ -0.97
FN1-225ENST00000494446 PPP1R12BO60237 982 aaPredicted RBP8.99□□□□□ -0.97
FN1-225ENST00000494446 U2AF1L5P0DN76 240 aaPredicted RBP8.99□□□□□ -0.97
FN1-225ENST00000494446 GJA5P36382 358 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 U2AF1Q01081 240 aaKnown RBP eCLIP8.99□□□□□ -0.97
FN1-225ENST00000494446 PDIA6Q15084 440 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 MTFR1Q15390 333 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 SF3B3Q15393 1217 aaKnown RBP8.99□□□□□ -0.97
FN1-225ENST00000494446 PROSER3Q2NL68 480 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 RTL5Q5HYW3 569 aaPredicted RBP8.99□□□□□ -0.97
FN1-225ENST00000494446 COPS6Q7L5N1 327 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 LRP10Q7Z4F1 713 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 FAM89AQ96GI7 184 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 PODXL2Q9NZ53 605 aa8.99□□□□□ -0.97
FN1-225ENST00000494446 MGAMO43451 1857 aa8.98□□□□□ -0.97
FN1-225ENST00000494446 PITPNM1O00562 1244 aa8.98□□□□□ -0.97
FN1-225ENST00000494446 ECM2O94769 699 aaPredicted RBP8.98□□□□□ -0.97
FN1-225ENST00000494446 FXR2P51116 673 aaKnown RBP eCLIP8.98□□□□□ -0.97
FN1-225ENST00000494446 TAF1CQ15572 869 aaPredicted RBP8.98□□□□□ -0.97
FN1-225ENST00000494446 PODNQ7Z5L7 613 aa8.98□□□□□ -0.97
FN1-225ENST00000494446 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.98□□□□□ -0.97
FN1-225ENST00000494446 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
FN1-225ENST00000494446 CFAP53Q96M91 514 aa8.98□□□□□ -0.97
FN1-225ENST00000494446 ZFYVE28Q9HCC9 887 aa8.98□□□□□ -0.97
FN1-225ENST00000494446 NUDCQ9Y266 331 aa8.98□□□□□ -0.97
FN1-225ENST00000494446 EVI5O60447 810 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 KIF22Q14807 665 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 MAP3K11Q16584 847 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 ARHGAP39Q9C0H5 1083 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 DEFB129Q9H1M3 183 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 SEC31BQ9NQW1 1179 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 PRDM6Q9NQX0 595 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 SSC5DA1L4H1 1573 aa8.97□□□□□ -0.97
FN1-225ENST00000494446 COL1A1P02452 1464 aaPredicted RBP8.96□□□□□ -0.97
FN1-225ENST00000494446 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
FN1-225ENST00000494446 IREB2P48200 963 aaKnown RBP8.96□□□□□ -0.98
FN1-225ENST00000494446 EVX2Q03828 476 aa8.96□□□□□ -0.98
FN1-225ENST00000494446 DACT2Q5SW24 774 aa8.96□□□□□ -0.98
FN1-225ENST00000494446 GPR153Q6NV75 609 aa8.96□□□□□ -0.98
FN1-225ENST00000494446 UBE2Q1Q7Z7E8 422 aa8.96□□□□□ -0.98
FN1-225ENST00000494446 ELP3Q9H9T3 547 aa8.96□□□□□ -0.98
FN1-225ENST00000494446 MTMR10Q9NXD2 777 aa8.96□□□□□ -0.98
FN1-225ENST00000494446 MYH3P11055 1940 aa8.95□□□□□ -0.98
FN1-225ENST00000494446 ATP5J2-PTCD1G3V325 749 aa8.95□□□□□ -0.98
FN1-225ENST00000494446 IRS4O14654 1257 aaPredicted RBP8.95□□□□□ -0.98
FN1-225ENST00000494446 PER1O15534 1290 aaPredicted RBP8.95□□□□□ -0.98
FN1-225ENST00000494446 FARP2O94887 1054 aaPredicted RBP8.95□□□□□ -0.98
FN1-225ENST00000494446 CCL5P13501 91 aa8.95□□□□□ -0.98
FN1-225ENST00000494446 GJA8P48165 433 aa8.95□□□□□ -0.98
FN1-225ENST00000494446 SUPT20HL1Q3ZLR7 823 aa8.95□□□□□ -0.98
FN1-225ENST00000494446 KIAA0825Q8IV33 1275 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms