RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
NR1H3-225ENST00000494018 SPTBN5Q9NRC6 3674 aaKnown RBP12.83□□□□□ -0.36
NR1H3-225ENST00000494018 COL3A1P02461 1466 aaPredicted RBP12.83□□□□□ -0.36
NR1H3-225ENST00000494018 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
NR1H3-225ENST00000494018 TMC4Q7Z404 712 aa12.82□□□□□ -0.36
NR1H3-225ENST00000494018 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
NR1H3-225ENST00000494018 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
NR1H3-225ENST00000494018 RSPH6AQ9H0K4 717 aa12.82□□□□□ -0.36
NR1H3-225ENST00000494018 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
NR1H3-225ENST00000494018 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
NR1H3-225ENST00000494018 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
NR1H3-225ENST00000494018 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
NR1H3-225ENST00000494018 COL9A1P20849 921 aa12.81□□□□□ -0.36
NR1H3-225ENST00000494018 OTUD7BQ6GQQ9 843 aa12.81□□□□□ -0.36
NR1H3-225ENST00000494018 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
NR1H3-225ENST00000494018 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
NR1H3-225ENST00000494018 MTMR10Q9NXD2 777 aa12.81□□□□□ -0.36
NR1H3-225ENST00000494018 ZBTB48P10074 688 aaPredicted RBP12.8□□□□□ -0.36
NR1H3-225ENST00000494018 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
NR1H3-225ENST00000494018 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
NR1H3-225ENST00000494018 SEC31BQ9NQW1 1179 aa12.8□□□□□ -0.36
NR1H3-225ENST00000494018 GGA1Q9UJY5 639 aa12.8□□□□□ -0.36
NR1H3-225ENST00000494018 PRUNE2Q8WUY3 3088 aa12.79□□□□□ -0.36
NR1H3-225ENST00000494018 EVI5O60447 810 aa12.79□□□□□ -0.36
NR1H3-225ENST00000494018 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
NR1H3-225ENST00000494018 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
NR1H3-225ENST00000494018 PDIA6Q15084 440 aa12.79□□□□□ -0.36
NR1H3-225ENST00000494018 LAMB1P07942 1786 aa12.79□□□□□ -0.36
NR1H3-225ENST00000494018 SSC5DA1L4H1 1573 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 A0A1W2PPC1 479 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 COPS6Q7L5N1 327 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 LRP10Q7Z4F1 713 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 UBE2Q1Q7Z7E8 422 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 OGFOD1Q8N543 542 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
NR1H3-225ENST00000494018 ELP3Q9H9T3 547 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 ALPK3Q96L96 1907 aa12.78□□□□□ -0.36
NR1H3-225ENST00000494018 BCAMP50895 628 aa12.77□□□□□ -0.37
NR1H3-225ENST00000494018 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
NR1H3-225ENST00000494018 XAGE3Q8WTP9 111 aa12.77□□□□□ -0.37
NR1H3-225ENST00000494018 FAM161BQ96MY7 647 aa12.77□□□□□ -0.37
NR1H3-225ENST00000494018 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.37
NR1H3-225ENST00000494018 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
NR1H3-225ENST00000494018 PCDHAC2Q9Y5I4 1007 aa12.77□□□□□ -0.37
NR1H3-225ENST00000494018 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
NR1H3-225ENST00000494018 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
NR1H3-225ENST00000494018 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
NR1H3-225ENST00000494018 CCL5P13501 91 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
NR1H3-225ENST00000494018 KIAA0825Q8IV33 1275 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 FAM43AQ8N2R8 423 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 BRI3BPQ8WY22 251 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 OPTNQ96CV9 577 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 BIN2Q9UBW5 565 aaPredicted RBP12.76□□□□□ -0.37
NR1H3-225ENST00000494018 ERBB4Q15303 1308 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
NR1H3-225ENST00000494018 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
NR1H3-225ENST00000494018 GJA8P48165 433 aa12.75□□□□□ -0.37
NR1H3-225ENST00000494018 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
NR1H3-225ENST00000494018 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
NR1H3-225ENST00000494018 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
NR1H3-225ENST00000494018 NBPF12Q5TAG4 269 aaPredicted RBP12.75□□□□□ -0.37
NR1H3-225ENST00000494018 OTOFQ9HC10 1997 aa12.75□□□□□ -0.37
NR1H3-225ENST00000494018 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
NR1H3-225ENST00000494018 LAMA2P24043 3122 aaKnown RBP12.75□□□□□ -0.37
NR1H3-225ENST00000494018 CCL15-CCL14A0A0B4J2E2 113 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
NR1H3-225ENST00000494018 SYN1P17600 705 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 CTGFP29279 349 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 KIF22Q14807 665 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 MAP3K11Q16584 847 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 CCL15Q16663 113 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
NR1H3-225ENST00000494018 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
NR1H3-225ENST00000494018 GJB1P08034 283 aa12.73□□□□□ -0.37
NR1H3-225ENST00000494018 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
NR1H3-225ENST00000494018 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
NR1H3-225ENST00000494018 U2AF1L4Q8WU68 220 aaKnown RBP12.73□□□□□ -0.37
NR1H3-225ENST00000494018 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
NR1H3-225ENST00000494018 GDF15Q99988 308 aa12.73□□□□□ -0.37
NR1H3-225ENST00000494018 AOX1Q06278 1338 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
NR1H3-225ENST00000494018 GRK4P32298 578 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 RAET1EQ8TD07 263 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 UNC93B1Q9H1C4 597 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 RIPOR2Q9Y4F9 1068 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
NR1H3-225ENST00000494018 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
NR1H3-225ENST00000494018 IRS2Q9Y4H2 1338 aa12.71□□□□□ -0.37
NR1H3-225ENST00000494018 IREB2P48200 963 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms