RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 FAM83CQ9BQN1 747 aa7.11□□□□□ -1.27
SNRNP27-204ENST00000487029 UBAP1LF5GYI3 381 aa7.1□□□□□ -1.27
SNRNP27-204ENST00000487029 CYP2E1P05181 493 aaPredicted RBP7.1□□□□□ -1.27
SNRNP27-204ENST00000487029 BMP3P12645 472 aa7.1□□□□□ -1.27
SNRNP27-204ENST00000487029 PREPP48147 710 aa7.1□□□□□ -1.27
SNRNP27-204ENST00000487029 HYAL2Q12891 473 aa7.09□□□□□ -1.27
SNRNP27-204ENST00000487029 CAPN12Q6ZSI9 719 aa7.09□□□□□ -1.27
SNRNP27-204ENST00000487029 BEND4Q6ZU67 534 aa7.09□□□□□ -1.27
SNRNP27-204ENST00000487029 PROSER2Q86WR7 435 aaPredicted RBP7.09□□□□□ -1.27
SNRNP27-204ENST00000487029 ABI1Q8IZP0 508 aa7.09□□□□□ -1.27
SNRNP27-204ENST00000487029 KCNF1Q9H3M0 494 aa7.09□□□□□ -1.27
SNRNP27-204ENST00000487029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.09□□□□□ -1.27
SNRNP27-204ENST00000487029 A6NJR5 290 aa7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 WDR64B1ANS9 1081 aa7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 TNFRSF10BO14763 440 aa7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 SMNDC1O75940 238 aaKnown RBP eCLIP7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 KLHL23Q8NBE8 558 aa7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 FAM200AQ8TCP9 573 aa7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 CALR3Q96L12 384 aaKnown RBP7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 POP1Q99575 1024 aaKnown RBP7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.08□□□□□ -1.28
SNRNP27-204ENST00000487029 KIF4AO95239 1232 aa7.07□□□□□ -1.28
SNRNP27-204ENST00000487029 CEP120Q8N960 986 aa7.07□□□□□ -1.28
SNRNP27-204ENST00000487029 MFSD14AQ96MC6 490 aa7.07□□□□□ -1.28
SNRNP27-204ENST00000487029 PBX4Q9BYU1 374 aa7.07□□□□□ -1.28
SNRNP27-204ENST00000487029 BRD2P25440 801 aaKnown RBP7.06□□□□□ -1.28
SNRNP27-204ENST00000487029 SCNN1AP37088 669 aa7.06□□□□□ -1.28
SNRNP27-204ENST00000487029 CFAP70Q5T0N1 1121 aa7.06□□□□□ -1.28
SNRNP27-204ENST00000487029 NFXL1Q6ZNB6 911 aa7.06□□□□□ -1.28
SNRNP27-204ENST00000487029 SHISA5Q8N114 240 aa7.06□□□□□ -1.28
SNRNP27-204ENST00000487029 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
SNRNP27-204ENST00000487029 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
SNRNP27-204ENST00000487029 PRMT3O60678 531 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 JAG1P78504 1218 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 OCLNQ16625 522 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 HGSNATQ68CP4 663 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 OGFOD2Q6N063 350 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 ADAM19Q9H013 955 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 ZMYND15Q9H091 742 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 SEC31BQ9NQW1 1179 aa7.05□□□□□ -1.28
SNRNP27-204ENST00000487029 ZBTB39O15060 712 aa7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 SART1O43290 800 aaKnown RBP7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 ACPPP15309 386 aa7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 NLRP12P59046 1061 aa7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 FAM117BQ6P1L5 589 aa7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 C16orf46Q6P387 395 aa7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 PIK3R5Q8WYR1 880 aa7.04□□□□□ -1.28
SNRNP27-204ENST00000487029 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
SNRNP27-204ENST00000487029 SGO2Q562F6 1265 aa7.03□□□□□ -1.28
SNRNP27-204ENST00000487029 ANKRD34AQ69YU3 496 aa7.03□□□□□ -1.28
SNRNP27-204ENST00000487029 GPR152Q8TDT2 470 aa7.03□□□□□ -1.28
SNRNP27-204ENST00000487029 PIM2Q9P1W9 311 aa7.03□□□□□ -1.28
SNRNP27-204ENST00000487029 F13BP05160 661 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 PTPRAP18433 802 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 ZAP70P43403 619 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 FAM69CQ0P6D2 419 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 NAA30Q147X3 362 aaPredicted RBP7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 MSMPQ1L6U9 139 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 CBLL1Q75N03 491 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 NCAPG2Q86XI2 1143 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 RNF208Q9H0X6 261 aa7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 ABI2Q9NYB9 513 aaPredicted RBP7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 NOVA2Q9UNW9 492 aaKnown RBP7.02□□□□□ -1.29
SNRNP27-204ENST00000487029 H3BRJ5 948 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 NFKBIEO00221 500 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 TRPA1O75762 1119 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 MAP4P27816 1152 aaKnown RBP7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 FBXL6Q8N531 539 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 HHIPQ96QV1 700 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 RUSC1Q9BVN2 902 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 TMEM63CQ9P1W3 806 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 CNTN3Q9P232 1028 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 KANSL3Q9P2N6 904 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 CCDC39Q9UFE4 941 aa7.01□□□□□ -1.29
SNRNP27-204ENST00000487029 RFX1P22670 979 aa7□□□□□ -1.29
SNRNP27-204ENST00000487029 PIP4K2BP78356 416 aa7□□□□□ -1.29
SNRNP27-204ENST00000487029 ZMIZ1Q9ULJ6 1067 aa7□□□□□ -1.29
SNRNP27-204ENST00000487029 HIF3AQ9Y2N7 669 aa7□□□□□ -1.29
SNRNP27-204ENST00000487029 C8AP07357 584 aa6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 FOSL1P15407 271 aa6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 FDX2Q6P4F2 183 aa6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 SLC7A3Q8WY07 619 aa6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 OSGEPQ9NPF4 335 aa6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 FNDC3AQ9Y2H6 1198 aaKnown RBP6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 LEMD3Q9Y2U8 911 aa6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 ACIN1Q9UKV3 1341 aaKnown RBP6.99□□□□□ -1.29
SNRNP27-204ENST00000487029 MEGF11A6BM72 1044 aa6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 SWI5Q1ZZU3 235 aa6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 WNT8BQ93098 351 aa6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 ELP3Q9H9T3 547 aa6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 SALL4Q9UJQ4 1053 aa6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 ANGEL1Q9UNK9 670 aaKnown RBP6.98□□□□□ -1.29
SNRNP27-204ENST00000487029 SUPT5HO00267 1087 aaKnown RBP6.97□□□□□ -1.29
SNRNP27-204ENST00000487029 GAS2O43903 313 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms