RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
CDC7-204ENST00000486509 SMARCA2P51531 1590 aa7.03□□□□□ -1.28
CDC7-204ENST00000486509 LAMC3Q9Y6N6 1575 aa7.03□□□□□ -1.28
CDC7-204ENST00000486509 TRPA1O75762 1119 aa7.03□□□□□ -1.28
CDC7-204ENST00000486509 TRIM28Q13263 835 aaKnown RBP7.03□□□□□ -1.28
CDC7-204ENST00000486509 CEP135Q66GS9 1140 aa7.03□□□□□ -1.28
CDC7-204ENST00000486509 WFDC8Q8IUA0 241 aa7.03□□□□□ -1.28
CDC7-204ENST00000486509 ATAD2BQ9ULI0 1458 aa7.03□□□□□ -1.28
CDC7-204ENST00000486509 CHRNA4P43681 627 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 PDE3BQ13370 1112 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 ORC1Q13415 861 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 GRIK4Q16099 956 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 PRRT3Q5FWE3 981 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 PEAR1Q5VY43 1037 aaPredicted RBP7.02□□□□□ -1.29
CDC7-204ENST00000486509 USPL1Q5W0Q7 1092 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 AEBP1Q8IUX7 1158 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 FMR1NBQ8N0W7 255 aaPredicted RBP7.02□□□□□ -1.29
CDC7-204ENST00000486509 IL22RA1Q8N6P7 574 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 HHIPQ96QV1 700 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 POP1Q99575 1024 aaKnown RBP7.02□□□□□ -1.29
CDC7-204ENST00000486509 LATS2Q9NRM7 1088 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 DZANK1Q9NVP4 752 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 DCTN4Q9UJW0 460 aa7.02□□□□□ -1.29
CDC7-204ENST00000486509 NESP48681 1621 aa7.01□□□□□ -1.29
CDC7-204ENST00000486509 C1QTNF9BB2RNN3 333 aa7.01□□□□□ -1.29
CDC7-204ENST00000486509 DEAF1O75398 565 aaPredicted RBP7.01□□□□□ -1.29
CDC7-204ENST00000486509 SMNDC1O75940 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDC7-204ENST00000486509 POLR3DP05423 398 aaPredicted RBP7.01□□□□□ -1.29
CDC7-204ENST00000486509 TMC7Q7Z402 723 aa7.01□□□□□ -1.29
CDC7-204ENST00000486509 CD163Q86VB7 1156 aa7.01□□□□□ -1.29
CDC7-204ENST00000486509 ZKSCAN3Q9BRR0 538 aa7.01□□□□□ -1.29
CDC7-204ENST00000486509 LACRTQ9GZZ8 138 aa7.01□□□□□ -1.29
CDC7-204ENST00000486509 AMOTL2Q9Y2J4 779 aa7.01□□□□□ -1.29
CDC7-204ENST00000486509 GPAT2Q6NUI2 795 aa7□□□□□ -1.29
CDC7-204ENST00000486509 DTWD1Q8N5C7 304 aa7□□□□□ -1.29
CDC7-204ENST00000486509 TMC1Q8TDI8 760 aa7□□□□□ -1.29
CDC7-204ENST00000486509 NIF3L1Q9GZT8 377 aa7□□□□□ -1.29
CDC7-204ENST00000486509 PATL2C9JE40 543 aaKnown RBP6.99□□□□□ -1.29
CDC7-204ENST00000486509 PROCP04070 461 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 EDN3P14138 238 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 ELNP15502 786 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 SELPP16109 830 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 RAC1P63000 192 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 FBXO11Q86XK2 927 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 GALNT12Q8IXK2 581 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 CACTIN-AS1Q8N1I8 211 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 TMEM102Q8N9M5 508 aaPredicted RBP6.99□□□□□ -1.29
CDC7-204ENST00000486509 ALKBH8Q96BT7 664 aaKnown RBP6.99□□□□□ -1.29
CDC7-204ENST00000486509 DMRTB1Q96MA1 342 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 OSMRQ99650 979 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 ADAM19Q9H013 955 aa6.99□□□□□ -1.29
CDC7-204ENST00000486509 SH2B1Q9NRF2 756 aaPredicted RBP6.99□□□□□ -1.29
CDC7-204ENST00000486509 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
CDC7-204ENST00000486509 MAPK1P28482 360 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 CDC27P30260 824 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 DSC3Q14574 896 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 SETDB1Q15047 1291 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 SHISA2Q6UWI4 295 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 NXPE3Q969Y0 559 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 PPME1Q9Y570 386 aa6.98□□□□□ -1.29
CDC7-204ENST00000486509 LINC01387J3KSC0 135 aa6.97□□□□□ -1.29
CDC7-204ENST00000486509 EIF1AYO14602 144 aaKnown RBP6.97□□□□□ -1.29
CDC7-204ENST00000486509 TM4SF5O14894 197 aa6.97□□□□□ -1.29
CDC7-204ENST00000486509 CPNE3O75131 537 aaKnown RBP6.97□□□□□ -1.29
CDC7-204ENST00000486509 NEFLP07196 543 aa6.97□□□□□ -1.29
CDC7-204ENST00000486509 EPHA1P21709 976 aa6.97□□□□□ -1.29
CDC7-204ENST00000486509 TXNDC11Q6PKC3 985 aa6.97□□□□□ -1.29
CDC7-204ENST00000486509 PDS5BQ9NTI5 1447 aa6.97□□□□□ -1.29
CDC7-204ENST00000486509 PEG3Q9GZU2 1588 aa6.96□□□□□ -1.29
CDC7-204ENST00000486509 A0A1W2PP55 124 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 DLL1O00548 723 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 TREHO43280 583 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 APBA3O96018 575 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 PTPRAP18433 802 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 CSRNP1Q96S65 589 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 BHLHE41Q9C0J9 482 aaPredicted RBP6.96□□□□□ -1.3
CDC7-204ENST00000486509 MUC3BQ9H195 1237 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 DNAJC25Q9H1X3 360 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 SOX13Q9UN79 622 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 SMARCA4P51532 1647 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.3
CDC7-204ENST00000486509 MSTNO14793 375 aa6.95□□□□□ -1.3
CDC7-204ENST00000486509 IGHA1P01876 353 aa6.95□□□□□ -1.3
CDC7-204ENST00000486509 CDC25BP30305 580 aa6.95□□□□□ -1.3
CDC7-204ENST00000486509 GALNT11Q8NCW6 608 aa6.95□□□□□ -1.3
CDC7-204ENST00000486509 LENG1Q96BZ8 264 aaPredicted RBP6.95□□□□□ -1.3
CDC7-204ENST00000486509 NACC1Q96RE7 527 aa6.95□□□□□ -1.3
CDC7-204ENST00000486509 TCF12Q99081 682 aa6.95□□□□□ -1.3
CDC7-204ENST00000486509 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
CDC7-204ENST00000486509 BAZ1AQ9NRL2 1556 aaPredicted RBP6.95□□□□□ -1.3
CDC7-204ENST00000486509 METTL12A8MUP2 240 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 C9orf172C9J069 976 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 ADGRE1Q14246 886 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 KIAA0319Q5VV43 1072 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 SND1Q7KZF4 910 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDC7-204ENST00000486509 VN1R5Q7Z5H4 357 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 CCDC74AQ96AQ1 378 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 ASB16Q96NS5 453 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 SRA1Q9HD15 236 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms