RNA–Protein interactions for RNA: ENST00000486271.5

NEPRO-217, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 2,842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-217ENST00000486271 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
NEPRO-217ENST00000486271 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
NEPRO-217ENST00000486271 OSBP2Q969R2 916 aa13.8□□□□□ -0.2
NEPRO-217ENST00000486271 SIPA1L3O60292 1781 aaPredicted RBP13.8□□□□□ -0.2
NEPRO-217ENST00000486271 A0A1B0GVL5 298 aa13.8□□□□□ -0.2
NEPRO-217ENST00000486271 H7C1W4 665 aa13.8□□□□□ -0.2
NEPRO-217ENST00000486271 EXOSC10Q01780 885 aaKnown RBP13.8□□□□□ -0.2
NEPRO-217ENST00000486271 WASHC4Q2M389 1173 aa13.8□□□□□ -0.2
NEPRO-217ENST00000486271 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
NEPRO-217ENST00000486271 USP27XA6NNY8 438 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
NEPRO-217ENST00000486271 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
NEPRO-217ENST00000486271 IQCB1Q15051 598 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 SYNE4Q8N205 404 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 ZSCAN16Q9H4T2 348 aaPredicted RBP13.79□□□□□ -0.2
NEPRO-217ENST00000486271 GOLGA6L19H0YKK7 550 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 FDPSP14324 419 aaKnown RBP13.79□□□□□ -0.2
NEPRO-217ENST00000486271 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.2
NEPRO-217ENST00000486271 SCARF1Q14162 830 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 ZMYM1Q5SVZ6 1142 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 CWC25Q9NXE8 425 aaPredicted RBP13.79□□□□□ -0.2
NEPRO-217ENST00000486271 DENND2AQ9ULE3 1009 aa13.79□□□□□ -0.2
NEPRO-217ENST00000486271 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
NEPRO-217ENST00000486271 RCOR1Q9UKL0 485 aa13.78□□□□□ -0.2
NEPRO-217ENST00000486271 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
NEPRO-217ENST00000486271 TPM3P06753 285 aa13.78□□□□□ -0.2
NEPRO-217ENST00000486271 TNNT1P13805 278 aa13.78□□□□□ -0.2
NEPRO-217ENST00000486271 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
NEPRO-217ENST00000486271 ISM2Q6H9L7 571 aa13.78□□□□□ -0.2
NEPRO-217ENST00000486271 C19orf44Q9H6X5 657 aa13.78□□□□□ -0.2
NEPRO-217ENST00000486271 TRMT1Q9NXH9 659 aaKnown RBP13.78□□□□□ -0.2
NEPRO-217ENST00000486271 BIN1O00499 593 aa13.77□□□□□ -0.2
NEPRO-217ENST00000486271 RNF113AO15541 343 aaKnown RBP13.77□□□□□ -0.2
NEPRO-217ENST00000486271 TPD52L1Q16890 204 aaPredicted RBP13.77□□□□□ -0.2
NEPRO-217ENST00000486271 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.2
NEPRO-217ENST00000486271 SYTL4Q96C24 671 aaPredicted RBP13.77□□□□□ -0.2
NEPRO-217ENST00000486271 CLIC4Q9Y696 253 aa13.77□□□□□ -0.2
NEPRO-217ENST00000486271 MRC1P22897 1456 aa13.77□□□□□ -0.2
NEPRO-217ENST00000486271 SH3TC1Q8TE82 1336 aa13.77□□□□□ -0.2
NEPRO-217ENST00000486271 BECN2A8MW95 431 aa13.77□□□□□ -0.21
NEPRO-217ENST00000486271 EYA2O00167 538 aa13.77□□□□□ -0.21
NEPRO-217ENST00000486271 PDIA4P13667 645 aaKnown RBP13.77□□□□□ -0.21
NEPRO-217ENST00000486271 ATF3P18847 181 aa13.77□□□□□ -0.21
NEPRO-217ENST00000486271 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.211e-7■■□□□ 14.2
NEPRO-217ENST00000486271 NKX2-3Q8TAU0 364 aa13.77□□□□□ -0.21
NEPRO-217ENST00000486271 HELLSQ9NRZ9 838 aa13.77□□□□□ -0.21
NEPRO-217ENST00000486271 KINO60870 393 aaKnown RBP13.77□□□□□ -0.21
NEPRO-217ENST00000486271 MTERF4Q7Z6M4 381 aaKnown RBP13.77□□□□□ -0.21
NEPRO-217ENST00000486271 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.21
NEPRO-217ENST00000486271 PCDHA7Q9UN72 937 aa13.77□□□□□ -0.21
NEPRO-217ENST00000486271 PHRF1Q9P1Y6 1649 aaKnown RBP13.76□□□□□ -0.21
NEPRO-217ENST00000486271 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 SDF4Q9BRK5 362 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 DSCC1Q9BVC3 393 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 FOXP2O15409 715 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 IGSF3O75054 1194 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 RXRAP19793 462 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 IL15P40933 162 aaPredicted RBP13.76□□□□□ -0.21
NEPRO-217ENST00000486271 NAA16Q6N069 864 aaPredicted RBP13.76□□□□□ -0.21
NEPRO-217ENST00000486271 PDCL2Q8N4E4 241 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 PALLDQ8WX93 1383 aa13.76□□□□□ -0.21
NEPRO-217ENST00000486271 AFDNP55196 1824 aaKnown RBP13.75□□□□□ -0.21
NEPRO-217ENST00000486271 HMGB1P09429 215 aaKnown RBP13.75□□□□□ -0.21
NEPRO-217ENST00000486271 NDUFA8P51970 172 aa13.75□□□□□ -0.21
NEPRO-217ENST00000486271 DHX40Q8IX18 779 aaKnown RBP13.75□□□□□ -0.21
NEPRO-217ENST00000486271 ENGASEQ8NFI3 743 aa13.75□□□□□ -0.21
NEPRO-217ENST00000486271 LLPHQ9BRT6 129 aaKnown RBP13.75□□□□□ -0.21
NEPRO-217ENST00000486271 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.75□□□□□ -0.21
NEPRO-217ENST00000486271 V9GYY5 206 aaPredicted RBP13.75□□□□□ -0.21
NEPRO-217ENST00000486271 ZAP70P43403 619 aa13.75□□□□□ -0.21
NEPRO-217ENST00000486271 AIFM3Q96NN9 605 aa13.75□□□□□ -0.21
NEPRO-217ENST00000486271 PUS7LQ9H0K6 701 aaKnown RBP13.75□□□□□ -0.21
NEPRO-217ENST00000486271 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
NEPRO-217ENST00000486271 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 KLF18A0A0U1RQI7 1052 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 FGAP02671 866 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 STX1AQ16623 288 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 LRRC8AQ8IWT6 810 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 XAGE2Q96GT9 111 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.74□□□□□ -0.213e-6■■■■□ 23
NEPRO-217ENST00000486271 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 FAM160A1Q05DH4 1040 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 SF3A1Q15459 793 aaKnown RBP13.74□□□□□ -0.21
NEPRO-217ENST00000486271 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
NEPRO-217ENST00000486271 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
NEPRO-217ENST00000486271 PRC1O43663 620 aa13.73□□□□□ -0.21
NEPRO-217ENST00000486271 GOLGA8BA8MQT2 603 aa13.73□□□□□ -0.21
NEPRO-217ENST00000486271 SKILP12757 684 aa13.73□□□□□ -0.21
NEPRO-217ENST00000486271 PTPN21Q16825 1174 aa13.73□□□□□ -0.21
NEPRO-217ENST00000486271 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
NEPRO-217ENST00000486271 ZHX1Q9UKY1 873 aaPredicted RBP13.73□□□□□ -0.21
NEPRO-217ENST00000486271 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
NEPRO-217ENST00000486271 KIF28PB7ZC32 967 aa13.72□□□□□ -0.21
NEPRO-217ENST00000486271 MARCKSP29966 332 aaPredicted RBP13.72□□□□□ -0.21
NEPRO-217ENST00000486271 STK38Q15208 465 aa13.72□□□□□ -0.21
NEPRO-217ENST00000486271 CCDC57Q2TAC2 916 aa13.72□□□□□ -0.21
NEPRO-217ENST00000486271 DPCR1Q3MIW9 517 aa13.72□□□□□ -0.21
NEPRO-217ENST00000486271 AGXT2Q9BYV1 514 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms