RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 NEFMP07197 916 aa14.69□□□□□ -0.06
CCDC18-208ENST00000479653 SP3Q02447 781 aa14.69□□□□□ -0.06
CCDC18-208ENST00000479653 LDLRAD1Q5T700 205 aa14.69□□□□□ -0.06
CCDC18-208ENST00000479653 OTUD7BQ6GQQ9 843 aa14.69□□□□□ -0.06
CCDC18-208ENST00000479653 LAMB4A4D0S4 1761 aa14.68□□□□□ -0.06
CCDC18-208ENST00000479653 WNT10BO00744 389 aa14.68□□□□□ -0.06
CCDC18-208ENST00000479653 CRHR2Q13324 411 aa14.68□□□□□ -0.06
CCDC18-208ENST00000479653 FBXW7Q969H0 707 aa14.68□□□□□ -0.06
CCDC18-208ENST00000479653 PODXL2Q9NZ53 605 aa14.68□□□□□ -0.06
CCDC18-208ENST00000479653 COL6A3P12111 3177 aa14.68□□□□□ -0.06
CCDC18-208ENST00000479653 MXD3Q9BW11 206 aa14.67□□□□□ -0.06
CCDC18-208ENST00000479653 TSPYL4Q9UJ04 414 aa14.67□□□□□ -0.06
CCDC18-208ENST00000479653 TAF1P21675 1872 aa14.66□□□□□ -0.06
CCDC18-208ENST00000479653 WTIPA6NIX2 430 aaPredicted RBP14.66□□□□□ -0.06
CCDC18-208ENST00000479653 SASH1O94885 1247 aa14.66□□□□□ -0.06
CCDC18-208ENST00000479653 ZBTB48P10074 688 aaPredicted RBP14.66□□□□□ -0.06
CCDC18-208ENST00000479653 PODNQ7Z5L7 613 aa14.66□□□□□ -0.06
CCDC18-208ENST00000479653 PTCH2Q9Y6C5 1203 aa14.66□□□□□ -0.06
CCDC18-208ENST00000479653 ATP5J2-PTCD1G3V325 749 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 CAP1Q01518 475 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 ARHGEF6Q15052 776 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 WNK4Q96J92 1243 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 CLMNQ96JQ2 1002 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 SEC31BQ9NQW1 1179 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 ZNF609O15014 1411 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 ANKRD36CQ5JPF3 1778 aa14.65□□□□□ -0.06
CCDC18-208ENST00000479653 IRS4O14654 1257 aaPredicted RBP14.64□□□□□ -0.07
CCDC18-208ENST00000479653 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
CCDC18-208ENST00000479653 APOBEC3FQ8IUX4 373 aaKnown RBP14.64□□□□□ -0.07
CCDC18-208ENST00000479653 LRRC37AA6NMS7 1700 aa14.63□□□□□ -0.07
CCDC18-208ENST00000479653 LAMB2P55268 1798 aa14.63□□□□□ -0.07
CCDC18-208ENST00000479653 PPP1R12BO60237 982 aaPredicted RBP14.63□□□□□ -0.07
CCDC18-208ENST00000479653 KCNA4P22459 653 aa14.63□□□□□ -0.07
CCDC18-208ENST00000479653 SH3TC2Q8TF17 1288 aa14.63□□□□□ -0.07
CCDC18-208ENST00000479653 SCN9AQ15858 1988 aa14.62□□□□□ -0.07
CCDC18-208ENST00000479653 PTPN18Q99952 460 aa14.62□□□□□ -0.07
CCDC18-208ENST00000479653 DEFB129Q9H1M3 183 aa14.62□□□□□ -0.07
CCDC18-208ENST00000479653 ATP2B4P23634 1241 aa14.61□□□□□ -0.07
CCDC18-208ENST00000479653 DACT2Q5SW24 774 aa14.61□□□□□ -0.07
CCDC18-208ENST00000479653 CCDC85AQ96PX6 553 aaPredicted RBP14.61□□□□□ -0.07
CCDC18-208ENST00000479653 XDHP47989 1333 aa14.61□□□□□ -0.07
CCDC18-208ENST00000479653 ANKRD13DQ6ZTN6 518 aa14.6□□□□□ -0.07
CCDC18-208ENST00000479653 PLBD2Q8NHP8 589 aa14.6□□□□□ -0.07
CCDC18-208ENST00000479653 ISCA1Q9BUE6 129 aa14.6□□□□□ -0.07
CCDC18-208ENST00000479653 COL4A1P02462 1669 aa14.6□□□□□ -0.07
CCDC18-208ENST00000479653 RBBP6Q7Z6E9 1792 aaKnown RBP14.6□□□□□ -0.07
CCDC18-208ENST00000479653 DDX60Q8IY21 1712 aaKnown RBP14.59□□□□□ -0.07
CCDC18-208ENST00000479653 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
CCDC18-208ENST00000479653 MAP3K11Q16584 847 aa14.59□□□□□ -0.07
CCDC18-208ENST00000479653 KIAA0825Q8IV33 1275 aa14.59□□□□□ -0.07
CCDC18-208ENST00000479653 LRCH3Q96II8 777 aa14.59□□□□□ -0.07
CCDC18-208ENST00000479653 NR2E3Q9Y5X4 410 aa14.59□□□□□ -0.07
CCDC18-208ENST00000479653 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
CCDC18-208ENST00000479653 KDM3BQ7LBC6 1761 aa14.58□□□□□ -0.08
CCDC18-208ENST00000479653 SOX1O00570 391 aaPredicted RBP14.58□□□□□ -0.08
CCDC18-208ENST00000479653 PPP2R1AP30153 589 aa14.58□□□□□ -0.08
CCDC18-208ENST00000479653 GJA5P36382 358 aa14.58□□□□□ -0.08
CCDC18-208ENST00000479653 STRIP1Q5VSL9 837 aa14.58□□□□□ -0.08
CCDC18-208ENST00000479653 HTATIP2Q9BUP3 242 aa14.58□□□□□ -0.08
CCDC18-208ENST00000479653 ZFYVE28Q9HCC9 887 aa14.58□□□□□ -0.08
CCDC18-208ENST00000479653 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
CCDC18-208ENST00000479653 IREB2P48200 963 aaKnown RBP14.57□□□□□ -0.08
CCDC18-208ENST00000479653 TAF1CQ15572 869 aaPredicted RBP14.57□□□□□ -0.08
CCDC18-208ENST00000479653 SUPT20HL1Q3ZLR7 823 aa14.57□□□□□ -0.08
CCDC18-208ENST00000479653 CCDC152Q4G0S7 254 aa14.57□□□□□ -0.08
CCDC18-208ENST00000479653 ANKRD18AQ8IVF6 992 aa14.57□□□□□ -0.08
CCDC18-208ENST00000479653 PRO3102Q9H379 93 aa14.57□□□□□ -0.08
CCDC18-208ENST00000479653 CHPF2Q9P2E5 772 aa14.57□□□□□ -0.08
CCDC18-208ENST00000479653 LAMA3Q16787 3333 aa14.56□□□□□ -0.08
CCDC18-208ENST00000479653 TESPA1A2RU30 521 aaPredicted RBP14.56□□□□□ -0.08
CCDC18-208ENST00000479653 UNCXA6NJT0 531 aa14.56□□□□□ -0.08
CCDC18-208ENST00000479653 HSP90B1P14625 803 aaKnown RBP14.56□□□□□ -0.08
CCDC18-208ENST00000479653 MMP14P50281 582 aa14.56□□□□□ -0.08
CCDC18-208ENST00000479653 KIF22Q14807 665 aa14.56□□□□□ -0.08
CCDC18-208ENST00000479653 DLGAP5Q15398 846 aa14.56□□□□□ -0.08
CCDC18-208ENST00000479653 TTLL5Q6EMB2 1281 aa14.56□□□□□ -0.08
CCDC18-208ENST00000479653 ANKRD13AQ8IZ07 590 aa14.56□□□□□ -0.08
CCDC18-208ENST00000479653 MTFR1Q15390 333 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 ZBTB38Q8NAP3 1195 aaPredicted RBP14.55□□□□□ -0.08
CCDC18-208ENST00000479653 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 OPTNQ96CV9 577 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 SHISA4Q96DD7 197 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 ARHGAP39Q9C0H5 1083 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 COA1Q9GZY4 146 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 ELP3Q9H9T3 547 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 MAPK8IP3Q9UPT6 1336 aa14.55□□□□□ -0.08
CCDC18-208ENST00000479653 USP2O75604 605 aaPredicted RBP14.54□□□□□ -0.08
CCDC18-208ENST00000479653 WDHD1O75717 1129 aaPredicted RBP14.54□□□□□ -0.08
CCDC18-208ENST00000479653 DSG3P32926 999 aa14.54□□□□□ -0.08
CCDC18-208ENST00000479653 NBPF12Q5TAG4 269 aaPredicted RBP14.54□□□□□ -0.08
CCDC18-208ENST00000479653 JARID2Q92833 1246 aaPredicted RBP14.54□□□□□ -0.08
CCDC18-208ENST00000479653 PLEKHF1Q96S99 279 aa14.54□□□□□ -0.08
CCDC18-208ENST00000479653 PPP2R3BQ9Y5P8 575 aa14.54□□□□□ -0.08
CCDC18-208ENST00000479653 MED23Q9ULK4 1368 aa14.53□□□□□ -0.08
CCDC18-208ENST00000479653 CCL15-CCL14A0A0B4J2E2 113 aa14.53□□□□□ -0.08
CCDC18-208ENST00000479653 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
CCDC18-208ENST00000479653 CLRN2A0PK11 232 aa14.53□□□□□ -0.08
CCDC18-208ENST00000479653 ZBTB7BO15156 539 aaPredicted RBP14.53□□□□□ -0.08
CCDC18-208ENST00000479653 MYO1BO43795 1136 aa14.53□□□□□ -0.08
CCDC18-208ENST00000479653 GTF2IP78347 998 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms