RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 STXBP5LQ9Y2K9 1186 aa13.28□□□□□ -0.28
CCHCR1-212ENST00000475684 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
CCHCR1-212ENST00000475684 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
CCHCR1-212ENST00000475684 USP17L3A6NCW0 530 aa13.27□□□□□ -0.29
CCHCR1-212ENST00000475684 USP17L4A6NCW7 530 aa13.27□□□□□ -0.29
CCHCR1-212ENST00000475684 WNT10BO00744 389 aa13.27□□□□□ -0.29
CCHCR1-212ENST00000475684 HTATSF1O43719 755 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-212ENST00000475684 UFL1O94874 794 aa13.27□□□□□ -0.29
CCHCR1-212ENST00000475684 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.29
CCHCR1-212ENST00000475684 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.29
CCHCR1-212ENST00000475684 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 EIF4A1P60842 406 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 CC2D1BQ5T0F9 858 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 PNISRQ8TF01 805 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
CCHCR1-212ENST00000475684 CEP290O15078 2479 aa13.25□□□□□ -0.29
CCHCR1-212ENST00000475684 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
CCHCR1-212ENST00000475684 SASH1O94885 1247 aa13.25□□□□□ -0.29
CCHCR1-212ENST00000475684 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-212ENST00000475684 PTPN18Q99952 460 aa13.25□□□□□ -0.29
CCHCR1-212ENST00000475684 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
CCHCR1-212ENST00000475684 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
CCHCR1-212ENST00000475684 RPS8P62241 208 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 SF3B3Q15393 1217 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 GPR153Q6NV75 609 aa13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 Q7L0L9 218 aa13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 NKX2-3Q8TAU0 364 aa13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 PRDM6Q9NQX0 595 aa13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 STAP2Q9UGK3 403 aa13.24□□□□□ -0.29
CCHCR1-212ENST00000475684 PPP1R12BO60237 982 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 HSPA5P11021 654 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 AIMP1Q12904 312 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 MAP3K11Q16584 847 aa13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 LRP10Q7Z4F1 713 aa13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 LAMA3Q16787 3333 aa13.23□□□□□ -0.29
CCHCR1-212ENST00000475684 COL4A1P02462 1669 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 TESPA1A2RU30 521 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 CNGB1Q14028 1251 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 POLA2Q14181 598 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 PDIA6Q15084 440 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 MTFR1Q15390 333 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 UBE2Q1Q7Z7E8 422 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 MXD3Q9BW11 206 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 ZFYVE28Q9HCC9 887 aa13.22□□□□□ -0.29
CCHCR1-212ENST00000475684 UNCXA6NJT0 531 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 EVI5O60447 810 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 ANXA1P04083 346 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 GJA5P36382 358 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 KIF22Q14807 665 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 TAF1CQ15572 869 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 COPS6Q7L5N1 327 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 DEFB129Q9H1M3 183 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 MTMR10Q9NXD2 777 aa13.21□□□□□ -0.29
CCHCR1-212ENST00000475684 LAMB1P07942 1786 aa13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 GJA8P48165 433 aa13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 PSME4Q14997 1843 aa13.2□□□□□ -0.3
CCHCR1-212ENST00000475684 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-212ENST00000475684 XAGE3Q8WTP9 111 aa13.19□□□□□ -0.3
CCHCR1-212ENST00000475684 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
CCHCR1-212ENST00000475684 ARHGAP39Q9C0H5 1083 aa13.19□□□□□ -0.3
CCHCR1-212ENST00000475684 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 COL1A1P02452 1464 aaPredicted RBP13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 GNRH1P01148 92 aa13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 GJB1P08034 283 aa13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 IREB2P48200 963 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 MMP14P50281 582 aa13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 PRMT2P55345 433 aa13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
CCHCR1-212ENST00000475684 WDHD1O75717 1129 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 CCL5P13501 91 aa13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 RNF208Q9H0X6 261 aa13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 ZNF646O15015 1829 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 SPTBN5Q9NRC6 3674 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-212ENST00000475684 XDHP47989 1333 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 SSC5DA1L4H1 1573 aa13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-212ENST00000475684 USP2O75604 605 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms