RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ME3Q16798 604 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 ANKRD45Q5TZF3 282 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 UBE3BQ7Z3V4 1068 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 AMOTL1Q8IY63 956 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 MAB21L3Q8N8X9 362 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 RASSF4Q9H2L5 321 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 ADAM21Q9UKJ8 722 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 ITGB4P16144 1822 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 SCN4AP35499 1836 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 ARID2Q68CP9 1835 aa4.84□□□□□ -1.63
USP16-205ENST00000474835 CCDC151A5D8V7 595 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 SARSP49591 514 aaKnown RBP4.84□□□□□ -1.64
USP16-205ENST00000474835 CCNG1P51959 295 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 SKOR1P84550 965 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 GIMAP6Q6P9H5 292 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 LUZP1Q86V48 1076 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 GPR161Q8N6U8 529 aaKnown RBP4.84□□□□□ -1.64
USP16-205ENST00000474835 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.84□□□□□ -1.64
USP16-205ENST00000474835 RUBCNQ92622 972 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 RABGGTAQ92696 567 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 SLC26A8Q96RN1 970 aa4.84□□□□□ -1.64
USP16-205ENST00000474835 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.64
USP16-205ENST00000474835 CACNA1SQ13698 1873 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 A0A1W2PQ27 194 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 A0A1W2PQ64 194 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 A0A1W2PQD8 194 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 TRIM6-TRIM34B2RNG4 842 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 CLGNO14967 610 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 FOXP2O15409 715 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 ALADP13716 330 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 PLEKHO1Q53GL0 409 aaPredicted RBP4.83□□□□□ -1.64
USP16-205ENST00000474835 TTLL7Q6ZT98 887 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 LRP10Q7Z4F1 713 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 MORC1Q86VD1 984 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 MEIS3Q99687 375 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 NOL10Q9BSC4 688 aaKnown RBP4.83□□□□□ -1.64
USP16-205ENST00000474835 TRIM34Q9BYJ4 488 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 SH2B1Q9NRF2 756 aaPredicted RBP4.83□□□□□ -1.64
USP16-205ENST00000474835 TPCN1Q9ULQ1 816 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 LIMCH1Q9UPQ0 1083 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 ZNF609O15014 1411 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 NR1I2O75469 434 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 ALDH1L1O75891 902 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 ETF1P62495 437 aaKnown RBP4.83□□□□□ -1.64
USP16-205ENST00000474835 CMPK2Q5EBM0 449 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 MICALL1Q8N3F8 863 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 TBC1D30Q9Y2I9 924 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 PSME4Q14997 1843 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 CDHR2Q9BYE9 1310 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 IGSF3O75054 1194 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 GPTP24298 496 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 BYSLQ13895 437 aaKnown RBP4.83□□□□□ -1.64
USP16-205ENST00000474835 ADCK5Q3MIX3 580 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 PREPLQ4J6C6 727 aaPredicted RBP4.83□□□□□ -1.64
USP16-205ENST00000474835 NBPF10Q6P3W6 841 aaKnown RBP4.83□□□□□ -1.64
USP16-205ENST00000474835 AEBP1Q8IUX7 1158 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 JMYQ8N9B5 988 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 KLHDC4Q8TBB5 520 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 EMILIN1Q9Y6C2 1016 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 LY75O60449 1722 aa4.83□□□□□ -1.64
USP16-205ENST00000474835 STRCP1A6NGW2 1772 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 PDLIM1O00151 329 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 KIF3CO14782 793 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 HTATSF1O43719 755 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 RXRBP28702 533 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 EXOSC10Q01780 885 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 SATB1Q01826 763 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 LRRFIP1Q32MZ4 808 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 CDC37L1Q7L3B6 337 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 PNMA6EA0A0J9YXQ4 647 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 SASH1O94885 1247 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 CCDC192P0DO97 292 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 BMP6P22004 513 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 ICA1Q05084 483 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 DNM1Q05193 864 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 APOBRQ0VD83 1088 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 BRD3Q15059 726 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 PLCB4Q15147 1175 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 ERCC6LQ2NKX8 1250 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 ANO6Q4KMQ2 910 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 MCTP2Q6DN12 878 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 WAPLQ7Z5K2 1190 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 IFT43Q96FT9 208 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 RSPH14Q9UHP6 348 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 TRAK1Q9UPV9 953 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 JRKLQ9Y4A0 524 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 KCPQ6ZWJ8 1503 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 XIRP1Q702N8 1843 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 LOC102724159A0A0B4J2E5 919 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 EIF3CLB5ME19 914 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 TAF1P21675 1872 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 ITIH3Q06033 890 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 DHX8Q14562 1220 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 PWP2Q15269 919 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 MMS22LQ6ZRQ5 1243 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 EFCAB13Q8IY85 973 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 KAZALD1Q96I82 304 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 CLIC6Q96NY7 704 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms