RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
ATG3-203ENST00000465980 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
ATG3-203ENST00000465980 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
ATG3-203ENST00000465980 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
ATG3-203ENST00000465980 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
ATG3-203ENST00000465980 KLRG2A4D1S0 409 aaPredicted RBP12.13□□□□□ -0.47
ATG3-203ENST00000465980 HTRA3P83110 453 aa12.13□□□□□ -0.47
ATG3-203ENST00000465980 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
ATG3-203ENST00000465980 GIGYF2Q6Y7W6 1299 aaKnown RBP12.13□□□□□ -0.47
ATG3-203ENST00000465980 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
ATG3-203ENST00000465980 ZNF428Q96B54 188 aa12.13□□□□□ -0.47
ATG3-203ENST00000465980 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
ATG3-203ENST00000465980 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
ATG3-203ENST00000465980 CHL1O00533 1208 aa12.12□□□□□ -0.47
ATG3-203ENST00000465980 NTSR2O95665 410 aa12.12□□□□□ -0.47
ATG3-203ENST00000465980 VEGFAP15692 232 aaPredicted RBP12.12□□□□□ -0.47
ATG3-203ENST00000465980 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
ATG3-203ENST00000465980 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
ATG3-203ENST00000465980 ZNF34Q8IZ26 560 aa12.12□□□□□ -0.47
ATG3-203ENST00000465980 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
ATG3-203ENST00000465980 RPGRQ92834 1020 aaKnown RBP12.12□□□□□ -0.47
ATG3-203ENST00000465980 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
ATG3-203ENST00000465980 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
ATG3-203ENST00000465980 SCN4AP35499 1836 aa12.11□□□□□ -0.47
ATG3-203ENST00000465980 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
ATG3-203ENST00000465980 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
ATG3-203ENST00000465980 FSTL1Q12841 308 aa12.11□□□□□ -0.47
ATG3-203ENST00000465980 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
ATG3-203ENST00000465980 SLC51AQ86UW1 340 aa12.11□□□□□ -0.47
ATG3-203ENST00000465980 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
ATG3-203ENST00000465980 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
ATG3-203ENST00000465980 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
ATG3-203ENST00000465980 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
ATG3-203ENST00000465980 DDNO94850 711 aaPredicted RBP12.1□□□□□ -0.47
ATG3-203ENST00000465980 ALDH1B1P30837 517 aa12.1□□□□□ -0.47
ATG3-203ENST00000465980 CRY2Q49AN0 593 aa12.1□□□□□ -0.47
ATG3-203ENST00000465980 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
ATG3-203ENST00000465980 PPP1R42Q7Z4L9 355 aa12.1□□□□□ -0.47
ATG3-203ENST00000465980 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
ATG3-203ENST00000465980 TMEM134Q9H6X4 195 aa12.1□□□□□ -0.47
ATG3-203ENST00000465980 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
ATG3-203ENST00000465980 ADGRG1Q9Y653 693 aa12.1□□□□□ -0.47
ATG3-203ENST00000465980 POTECB2RU33 542 aa12.09□□□□□ -0.47
ATG3-203ENST00000465980 SLFN5Q08AF3 891 aa12.09□□□□□ -0.47
ATG3-203ENST00000465980 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
ATG3-203ENST00000465980 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
ATG3-203ENST00000465980 RTKN2Q8IZC4 609 aa12.09□□□□□ -0.47
ATG3-203ENST00000465980 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
ATG3-203ENST00000465980 ZNF541Q9H0D2 1346 aa12.09□□□□□ -0.47
ATG3-203ENST00000465980 COL4A5P29400 1685 aa12.08□□□□□ -0.48
ATG3-203ENST00000465980 E9PSI1 815 aa12.08□□□□□ -0.48
ATG3-203ENST00000465980 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
ATG3-203ENST00000465980 DUSP27Q5VZP5 1158 aa12.08□□□□□ -0.48
ATG3-203ENST00000465980 SYNE4Q8N205 404 aa12.08□□□□□ -0.48
ATG3-203ENST00000465980 RBM17Q96I25 401 aaKnown RBP12.08□□□□□ -0.48
ATG3-203ENST00000465980 MBIPQ9NS73 344 aa12.08□□□□□ -0.48
ATG3-203ENST00000465980 IL16Q14005 1332 aa12.08□□□□□ -0.48
ATG3-203ENST00000465980 ELL2O00472 640 aaPredicted RBP12.07□□□□□ -0.48
ATG3-203ENST00000465980 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
ATG3-203ENST00000465980 IARSP41252 1262 aaKnown RBP12.07□□□□□ -0.48
ATG3-203ENST00000465980 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
ATG3-203ENST00000465980 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
ATG3-203ENST00000465980 NLRP10Q86W26 655 aa12.07□□□□□ -0.48
ATG3-203ENST00000465980 SNED1Q8TER0 1413 aa12.07□□□□□ -0.48
ATG3-203ENST00000465980 HOXA10P31260 410 aaPredicted RBP12.06□□□□□ -0.48
ATG3-203ENST00000465980 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
ATG3-203ENST00000465980 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
ATG3-203ENST00000465980 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
ATG3-203ENST00000465980 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
ATG3-203ENST00000465980 TRMT112Q9UI30 125 aaKnown RBP12.06□□□□□ -0.48
ATG3-203ENST00000465980 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
ATG3-203ENST00000465980 ACTN4O43707 911 aaKnown RBP12.05□□□□□ -0.48
ATG3-203ENST00000465980 HOXB7P09629 217 aa12.05□□□□□ -0.48
ATG3-203ENST00000465980 GNAI1P63096 354 aa12.05□□□□□ -0.48
ATG3-203ENST00000465980 DNAJC5GQ8N7S2 189 aa12.05□□□□□ -0.48
ATG3-203ENST00000465980 CRAMP1Q96RY5 1269 aa12.05□□□□□ -0.48
ATG3-203ENST00000465980 IFT57Q9NWB7 429 aa12.05□□□□□ -0.48
ATG3-203ENST00000465980 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
ATG3-203ENST00000465980 ABCC4O15439 1325 aa12.05□□□□□ -0.48
ATG3-203ENST00000465980 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 ZNF853P0CG23 659 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
ATG3-203ENST00000465980 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 PSMD1Q99460 953 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 MYH16Q9H6N6 1097 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 GJA3Q9Y6H8 435 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 SH3TC1Q8TE82 1336 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
ATG3-203ENST00000465980 MYH3P11055 1940 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 EAPPQ56P03 285 aaPredicted RBP12.03□□□□□ -0.48
ATG3-203ENST00000465980 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 LARGE2Q8N3Y3 721 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 JDP2Q8WYK2 163 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 HYPKQ9NX55 129 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 RNF123Q5XPI4 1314 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 CACNA1FO60840 1977 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 COL4A1P02462 1669 aa12.03□□□□□ -0.48
ATG3-203ENST00000465980 LTBP1Q14766 1721 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms