RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 IGLV1-40P01703 118 aa7.41□□□□□ -1.22
PTPN12-210ENST00000464313 OGFOD2Q6N063 350 aa7.41□□□□□ -1.22
PTPN12-210ENST00000464313 C16orf46Q6P387 395 aa7.41□□□□□ -1.22
PTPN12-210ENST00000464313 TREML1Q86YW5 311 aa7.41□□□□□ -1.22
PTPN12-210ENST00000464313 MYO19Q96H55 970 aa7.41□□□□□ -1.22
PTPN12-210ENST00000464313 KCNMB2Q9Y691 235 aa7.41□□□□□ -1.22
PTPN12-210ENST00000464313 H3BRB1 525 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 TNFRSF10BO14763 440 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 GSC2O15499 205 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 WISP1O95388 367 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 SPINK2P20155 84 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 FAM26DQ5JW98 314 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.4□□□□□ -1.22
PTPN12-210ENST00000464313 GALNT11Q8NCW6 608 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 GZF1Q9H116 711 aaPredicted RBP7.4□□□□□ -1.22
PTPN12-210ENST00000464313 TUT1Q9H6E5 874 aaKnown RBP7.4□□□□□ -1.22
PTPN12-210ENST00000464313 MTMR7Q9Y216 660 aa7.4□□□□□ -1.22
PTPN12-210ENST00000464313 PATL2C9JE40 543 aaKnown RBP7.39□□□□□ -1.23
PTPN12-210ENST00000464313 C8AP07357 584 aa7.39□□□□□ -1.23
PTPN12-210ENST00000464313 HELQQ8TDG4 1101 aa7.39□□□□□ -1.23
PTPN12-210ENST00000464313 SRA1Q9HD15 236 aaKnown RBP7.39□□□□□ -1.23
PTPN12-210ENST00000464313 STOML1Q9UBI4 398 aa7.39□□□□□ -1.23
PTPN12-210ENST00000464313 ADGRE2Q9UHX3 823 aa7.39□□□□□ -1.23
PTPN12-210ENST00000464313 SOWAHDA6NJG2 315 aa7.38□□□□□ -1.23
PTPN12-210ENST00000464313 LINC01387J3KSC0 135 aa7.38□□□□□ -1.23
PTPN12-210ENST00000464313 TXNDC11Q6PKC3 985 aa7.38□□□□□ -1.23
PTPN12-210ENST00000464313 MAP4K3Q8IVH8 894 aa7.38□□□□□ -1.23
PTPN12-210ENST00000464313 ARMC10Q8N2F6 343 aa7.38□□□□□ -1.23
PTPN12-210ENST00000464313 RBSNQ9H1K0 784 aa7.38□□□□□ -1.23
PTPN12-210ENST00000464313 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.23
PTPN12-210ENST00000464313 KCNK4Q9NYG8 393 aa7.38□□□□□ -1.23
PTPN12-210ENST00000464313 HOXD8P13378 290 aaPredicted RBP7.37□□□□□ -1.23
PTPN12-210ENST00000464313 MPSTP25325 297 aa7.37□□□□□ -1.23
PTPN12-210ENST00000464313 ZDHHC13Q8IUH4 622 aa7.37□□□□□ -1.23
PTPN12-210ENST00000464313 GLYCTKQ8IVS8 523 aa7.37□□□□□ -1.23
PTPN12-210ENST00000464313 EGFL7Q9UHF1 273 aa7.37□□□□□ -1.23
PTPN12-210ENST00000464313 PPME1Q9Y570 386 aa7.37□□□□□ -1.23
PTPN12-210ENST00000464313 ICMTO60725 284 aa7.36□□□□□ -1.23
PTPN12-210ENST00000464313 WNT11O96014 354 aa7.36□□□□□ -1.23
PTPN12-210ENST00000464313 CDC25BP30305 580 aa7.36□□□□□ -1.23
PTPN12-210ENST00000464313 SOX18P35713 384 aa7.36□□□□□ -1.23
PTPN12-210ENST00000464313 TRIP4Q15650 581 aaPredicted RBP7.36□□□□□ -1.23
PTPN12-210ENST00000464313 COL13A1Q5TAT6 717 aaPredicted RBP7.36□□□□□ -1.23
PTPN12-210ENST00000464313 INTS5Q6P9B9 1019 aaKnown RBP7.36□□□□□ -1.23
PTPN12-210ENST00000464313 ACAD11Q709F0 780 aa7.36□□□□□ -1.23
PTPN12-210ENST00000464313 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
PTPN12-210ENST00000464313 LACRTQ9GZZ8 138 aa7.36□□□□□ -1.23
PTPN12-210ENST00000464313 ZBTB39O15060 712 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 DHX15O43143 795 aaKnown RBP7.35□□□□□ -1.23
PTPN12-210ENST00000464313 GRIK1P39086 918 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 ATP11AP98196 1134 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 ADAMTSL4Q6UY14 1074 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 TRIM42Q8IWZ5 723 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 DCAF11Q8TEB1 546 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 CARD10Q9BWT7 1032 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 C7orf69Q9H7B7 122 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 STIM2Q9P246 746 aa7.35□□□□□ -1.23
PTPN12-210ENST00000464313 CD68P34810 354 aaPredicted RBP7.34□□□□□ -1.23
PTPN12-210ENST00000464313 FKBP4Q02790 459 aaKnown RBP eCLIP7.34□□□□□ -1.23
PTPN12-210ENST00000464313 NFIAQ12857 509 aa7.34□□□□□ -1.23
PTPN12-210ENST00000464313 ECM1Q16610 540 aa7.34□□□□□ -1.23
PTPN12-210ENST00000464313 NLRP13Q86W25 1043 aa7.34□□□□□ -1.23
PTPN12-210ENST00000464313 DTX1Q86Y01 620 aa7.34□□□□□ -1.23
PTPN12-210ENST00000464313 POU5F2Q8N7G0 328 aa7.34□□□□□ -1.23
PTPN12-210ENST00000464313 UTP4Q969X6 686 aaKnown RBP7.34□□□□□ -1.23
PTPN12-210ENST00000464313 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
PTPN12-210ENST00000464313 BIN2Q9UBW5 565 aaPredicted RBP7.34□□□□□ -1.23
PTPN12-210ENST00000464313 HMX2A2RU54 273 aa7.33□□□□□ -1.24
PTPN12-210ENST00000464313 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
PTPN12-210ENST00000464313 SF3B2Q13435 895 aaKnown RBP7.33□□□□□ -1.24
PTPN12-210ENST00000464313 SND1Q7KZF4 910 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPN12-210ENST00000464313 ATCAYQ86WG3 371 aa7.33□□□□□ -1.24
PTPN12-210ENST00000464313 PODXL2Q9NZ53 605 aa7.33□□□□□ -1.24
PTPN12-210ENST00000464313 TM4SF5O14894 197 aa7.32□□□□□ -1.24
PTPN12-210ENST00000464313 EIF1AXP47813 144 aaKnown RBP7.32□□□□□ -1.24
PTPN12-210ENST00000464313 CEP135Q66GS9 1140 aa7.32□□□□□ -1.24
PTPN12-210ENST00000464313 KIAA1211Q6ZU35 1233 aa7.32□□□□□ -1.24
PTPN12-210ENST00000464313 CEP41Q9BYV8 373 aa7.32□□□□□ -1.24
PTPN12-210ENST00000464313 PRR19A6NJB7 356 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 DDX3YO15523 660 aaKnown RBP7.31□□□□□ -1.24
PTPN12-210ENST00000464313 NPR3P17342 541 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 CDC27P30260 824 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 ARHGAP4P98171 946 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 RNF43Q68DV7 783 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 ABTB2Q8N961 1025 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 OR13H1Q8NG92 308 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 UBASH3BQ8TF42 649 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 FAM46AQ96IP4 442 aaKnown RBP7.31□□□□□ -1.24
PTPN12-210ENST00000464313 RASSF4Q9H2L5 321 aa7.31□□□□□ -1.24
PTPN12-210ENST00000464313 UBAP1LF5GYI3 381 aa7.3□□□□□ -1.24
PTPN12-210ENST00000464313 FAM13AO94988 1023 aa7.3□□□□□ -1.24
PTPN12-210ENST00000464313 ZAP70P43403 619 aa7.3□□□□□ -1.24
PTPN12-210ENST00000464313 FBLN7Q53RD9 439 aa7.3□□□□□ -1.24
PTPN12-210ENST00000464313 NOM1Q5C9Z4 860 aaKnown RBP7.3□□□□□ -1.24
PTPN12-210ENST00000464313 DBNDD2Q9BQY9 259 aa7.3□□□□□ -1.24
PTPN12-210ENST00000464313 SH2B1Q9NRF2 756 aaPredicted RBP7.3□□□□□ -1.24
PTPN12-210ENST00000464313 FSCN2O14926 492 aa7.29□□□□□ -1.24
PTPN12-210ENST00000464313 ADAM11O75078 769 aa7.29□□□□□ -1.24
PTPN12-210ENST00000464313 HYAL2Q12891 473 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms