RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 A0A0A0MRY4 1105 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 UNCXA6NJT0 531 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 ZBTB39O15060 712 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 LDHBP07195 334 aaKnown RBP4.97□□□□□ -1.61
HDAC6-212ENST00000461608 SELPP16109 830 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 XPCQ01831 940 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-212ENST00000461608 TBC1D8BQ0IIM8 1120 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 ENOX2Q16206 610 aaKnown RBP4.97□□□□□ -1.61
HDAC6-212ENST00000461608 XKR5Q6UX68 686 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 ATCAYQ86WG3 371 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 GPR152Q8TDT2 470 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 EFCC1Q9HA90 598 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 JPH1Q9HDC5 661 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-212ENST00000461608 KCNH4Q9UQ05 1017 aa4.97□□□□□ -1.61
HDAC6-212ENST00000461608 TAL1P17542 331 aaPredicted RBP4.96□□□□□ -1.62
HDAC6-212ENST00000461608 SSTR4P31391 388 aa4.96□□□□□ -1.62
HDAC6-212ENST00000461608 INPP5BP32019 993 aa4.96□□□□□ -1.62
HDAC6-212ENST00000461608 PLAURQ03405 335 aa4.96□□□□□ -1.62
HDAC6-212ENST00000461608 SHISA2Q6UWI4 295 aa4.96□□□□□ -1.62
HDAC6-212ENST00000461608 DMGDHQ9UI17 866 aaKnown RBP4.96□□□□□ -1.62
HDAC6-212ENST00000461608 SLC6A14Q9UN76 642 aa4.96□□□□□ -1.62
HDAC6-212ENST00000461608 PNMA6FA0A0J9YX94 578 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 GSC2O15499 205 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 CPNE3O75131 537 aaKnown RBP4.95□□□□□ -1.62
HDAC6-212ENST00000461608 EGFRP00533 1210 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 TCF3P15923 654 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 C8orf34Q49A92 452 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 FAM26DQ5JW98 314 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 ILDR2Q71H61 639 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 TMC4Q7Z404 712 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 ZNF438Q7Z4V0 828 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 NUDT8Q8WV74 236 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 PMEPA1Q969W9 287 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 CSRNP1Q96S65 589 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 UBE2OQ9C0C9 1292 aaKnown RBP4.95□□□□□ -1.62
HDAC6-212ENST00000461608 NIF3L1Q9GZT8 377 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 KIAA1522Q9P206 1035 aaPredicted RBP4.95□□□□□ -1.62
HDAC6-212ENST00000461608 SPG7Q9UQ90 795 aa4.95□□□□□ -1.62
HDAC6-212ENST00000461608 UBAP1LF5GYI3 381 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 GIPC1O14908 333 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 SORBS3O60504 671 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 RECKO95980 971 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 GNA15P30679 374 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 GRIK1P39086 918 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 AFF1P51825 1210 aaKnown RBP4.94□□□□□ -1.62
HDAC6-212ENST00000461608 DAB2P98082 770 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 MRPL58Q14197 206 aaKnown RBP4.94□□□□□ -1.62
HDAC6-212ENST00000461608 GSX2Q9BZM3 304 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 SRCIN1Q9C0H9 1055 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 IGFLR1Q9H665 355 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 IGSF5Q9NSI5 407 aa4.94□□□□□ -1.62
HDAC6-212ENST00000461608 DNAJB12Q9NXW2 375 aaKnown RBP4.94□□□□□ -1.62
HDAC6-212ENST00000461608 RTCBQ9Y3I0 505 aaKnown RBP4.94□□□□□ -1.62
HDAC6-212ENST00000461608 EIF1AYO14602 144 aaKnown RBP4.93□□□□□ -1.62
HDAC6-212ENST00000461608 OPLAHO14841 1288 aa4.93□□□□□ -1.62
HDAC6-212ENST00000461608 PSMD2Q13200 908 aa4.93□□□□□ -1.62
HDAC6-212ENST00000461608 CRELD1Q96HD1 420 aa4.93□□□□□ -1.62
HDAC6-212ENST00000461608 METTL5Q9NRN9 209 aaKnown RBP4.93□□□□□ -1.62
HDAC6-212ENST00000461608 ZFATQ9P243 1243 aa4.93□□□□□ -1.62
HDAC6-212ENST00000461608 PARP2Q9UGN5 583 aa4.93□□□□□ -1.62
HDAC6-212ENST00000461608 KCNMB2Q9Y691 235 aa4.93□□□□□ -1.62
HDAC6-212ENST00000461608 SCAMP3O14828 347 aaKnown RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 PHACTR2O75167 634 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 XYLBO75191 536 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 TNFRSF21O75509 655 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 RGS9O75916 674 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 NFKB1P19838 968 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 IREB2P48200 963 aaKnown RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 GP2P55259 537 aaKnown RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 TRIP4Q15650 581 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 GRIK5Q16478 980 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 PSAPL1Q6NUJ1 521 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 PRR23CQ6ZRP0 262 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 NLRP13Q86W25 1043 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 FMR1NBQ8N0W7 255 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 CMTR1Q8N1G2 835 aaKnown RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 WFDC12Q8WWY7 111 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 PNMA5Q96PV4 448 aa4.92□□□□□ -1.62
HDAC6-212ENST00000461608 DUSP9Q99956 384 aaKnown RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 ABI2Q9NYB9 513 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-212ENST00000461608 ZBTB42B2RXF5 422 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 FSTP19883 344 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 SOX18P35713 384 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 PCSK7Q16549 785 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 KRT25Q7Z3Z0 450 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 DMRTC2Q8IXT2 367 aaPredicted RBP4.91□□□□□ -1.62
HDAC6-212ENST00000461608 DTWD1Q8N5C7 304 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 DCAF11Q8TEB1 546 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 SSBP4Q9BWG4 385 aaPredicted RBP4.91□□□□□ -1.62
HDAC6-212ENST00000461608 GGNBP2Q9H3C7 697 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 ELP3Q9H9T3 547 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 NLRP2Q9NX02 1062 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 VTI1BQ9UEU0 232 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 USP20Q9Y2K6 914 aa4.91□□□□□ -1.62
HDAC6-212ENST00000461608 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.91□□□□□ -1.62
HDAC6-212ENST00000461608 EIF4BP23588 611 aaKnown RBP4.9□□□□□ -1.63
HDAC6-212ENST00000461608 MLLT1Q03111 559 aaPredicted RBP4.9□□□□□ -1.63
HDAC6-212ENST00000461608 ORC1Q13415 861 aa4.9□□□□□ -1.63
HDAC6-212ENST00000461608 CCINQ13939 588 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms