RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 DNA2P51530 1060 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 PKNOX2Q96KN3 472 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 PHF23Q9BUL5 403 aaPredicted RBP11.93□□□□□ -0.5
CTC1-202ENST00000449476 KDM5AP29375 1690 aaKnown RBP11.93□□□□□ -0.5
CTC1-202ENST00000449476 GSPT1P15170 499 aaKnown RBP11.93□□□□□ -0.5
CTC1-202ENST00000449476 LUZP1Q86V48 1076 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 VPS36Q86VN1 386 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 PLBD2Q8NHP8 589 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 TRIM75PA6NK02 468 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 POLR3GO15318 223 aaPredicted RBP11.93□□□□□ -0.5
CTC1-202ENST00000449476 FAM89AQ96GI7 184 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 SUCLG2Q96I99 432 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 UTP14AQ9BVJ6 771 aaKnown RBP11.93□□□□□ -0.5
CTC1-202ENST00000449476 ZSWIM4Q9H7M6 989 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 HELLSQ9NRZ9 838 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 PLXNC1O60486 1568 aa11.93□□□□□ -0.5
CTC1-202ENST00000449476 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
CTC1-202ENST00000449476 NEFHP12036 1026 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 RRAGBQ5VZM2 374 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.92□□□□□ -0.54e-7■■■■■ 130
CTC1-202ENST00000449476 RXRAP19793 462 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 PTGS1P23219 599 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 RFC4P35249 363 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 ERVK-7P63135 1459 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
CTC1-202ENST00000449476 CCDC40Q4G0X9 1142 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 MIGA1Q8NAN2 632 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 PLEKHF1Q96S99 279 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 USP44Q9H0E7 712 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 DNAI1Q9UI46 699 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 TNIP1Q15025 636 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 DDB1Q16531 1140 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 TAX1BP1Q86VP1 789 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 MAGEB6Q8N7X4 407 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 SETDB2Q96T68 719 aa11.92□□□□□ -0.5
CTC1-202ENST00000449476 GNAT2P19087 354 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 CUL5Q93034 780 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 RMND1Q9NWS8 449 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
CTC1-202ENST00000449476 DTNBO60941 627 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 TSPY3P0CV98 308 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 TSPY8P0CW00 308 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 MCM3P25205 808 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 HSPA4P34932 840 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 WWC2Q6AWC2 1192 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 FAM114A1Q8IWE2 563 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 GNAQP50148 359 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 DHX58Q96C10 678 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 MAGEB6P1A0A0J9YX57 407 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 ZNF445P59923 1031 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 SPAG1Q07617 926 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 GCKRQ14397 625 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 TCERG1LQ5VWI1 586 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 LMBRD1Q9NUN5 540 aa11.91□□□□□ -0.5
CTC1-202ENST00000449476 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
CTC1-202ENST00000449476 STAT6P42226 847 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 GSTO1P78417 241 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 A0A1B0GVL5 298 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 ATL3Q6DD88 541 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 CTAGE1Q96RT6 745 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTC1-202ENST00000449476 ARHGEF10O15013 1369 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 TRIM21P19474 475 aaKnown RBP11.9□□□□□ -0.5
CTC1-202ENST00000449476 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
CTC1-202ENST00000449476 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
CTC1-202ENST00000449476 SMARCC1Q92922 1105 aaPredicted RBP11.9□□□□□ -0.5
CTC1-202ENST00000449476 KBTBD3Q8NAB2 608 aa11.9□□□□□ -0.51
CTC1-202ENST00000449476 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.51
CTC1-202ENST00000449476 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.51
CTC1-202ENST00000449476 EXOC1Q9NV70 894 aa11.9□□□□□ -0.51
CTC1-202ENST00000449476 AKR1B10O60218 316 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 HLA-DOAP06340 250 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTC1-202ENST00000449476 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
CTC1-202ENST00000449476 IFNKQ9P0W0 207 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 A1BGP04217 495 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 SSR1P43307 286 aaKnown RBP11.89□□□□□ -0.51
CTC1-202ENST00000449476 HEATR3Q7Z4Q2 680 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
CTC1-202ENST00000449476 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 FAM160A1Q05DH4 1040 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 CCDC178Q5BJE1 867 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 NCOA5Q9HCD5 579 aaKnown RBP11.89□□□□□ -0.51
CTC1-202ENST00000449476 TMEM2Q9UHN6 1383 aa11.89□□□□□ -0.51
CTC1-202ENST00000449476 SEPT7Q16181 437 aaKnown RBP11.88□□□□□ -0.51
CTC1-202ENST00000449476 ALS2CR12Q96Q35 445 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.88□□□□□ -0.517e-6■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms