RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 HSP90AB3PQ58FF7 597 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 TDRD7Q8NHU6 1098 aaKnown RBP15.13■□□□□ 0.01
SHC1-210ENST00000448116 CTDNEP1O95476 244 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 HSPD1P10809 573 aaKnown RBP15.13■□□□□ 0.01
SHC1-210ENST00000448116 FSIP1Q8NA03 581 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 CCDC94Q9BW85 323 aaPredicted RBP15.13■□□□□ 0.01
SHC1-210ENST00000448116 PUS3Q9BZE2 481 aaKnown RBP15.13■□□□□ 0.01
SHC1-210ENST00000448116 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
SHC1-210ENST00000448116 CACTINQ8WUQ7 758 aaKnown RBP15.12■□□□□ 0.01
SHC1-210ENST00000448116 SDF4Q9BRK5 362 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 GOLPH3LQ9H4A5 285 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 CWC25Q9NXE8 425 aaPredicted RBP15.12■□□□□ 0.01
SHC1-210ENST00000448116 TNNT1P13805 278 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 ATF3P18847 181 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 ARID5BQ14865 1188 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 CCDC144BQ3MJ40 725 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 CCDC144CPQ8IYA2 1237 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 NBPF26B4DH59 902 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 FOXO4P98177 505 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 NBPF14Q5TI25 921 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 NBPF10Q6P3W6 841 aaKnown RBP15.12■□□□□ 0.01
SHC1-210ENST00000448116 ATG9AQ7Z3C6 839 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 PLA2G4DQ86XP0 818 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 NBPF15Q8N660 670 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 ZNF396Q96N95 335 aaPredicted RBP15.12■□□□□ 0.01
SHC1-210ENST00000448116 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
SHC1-210ENST00000448116 A0A1B0GUL7 405 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
SHC1-210ENST00000448116 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 SMARCC2Q8TAQ2 1214 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 RBM43Q6ZSC3 357 aaKnown RBP15.11■□□□□ 0.01
SHC1-210ENST00000448116 LLPHQ9BRT6 129 aaKnown RBP15.11■□□□□ 0.01
SHC1-210ENST00000448116 HELLSQ9NRZ9 838 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 USP54Q70EL1 1684 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 JCADQ9P266 1359 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHC1-210ENST00000448116 ADD1P35611 737 aaKnown RBP15.11■□□□□ 0.01
SHC1-210ENST00000448116 CASP7P55210 303 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 RCOR1Q9UKL0 485 aa15.11■□□□□ 0.01
SHC1-210ENST00000448116 RNF113AO15541 343 aaKnown RBP15.1■□□□□ 0.01
SHC1-210ENST00000448116 PDIA3P30101 505 aaKnown RBP15.1■□□□□ 0.01
SHC1-210ENST00000448116 IL15P40933 162 aaPredicted RBP15.1■□□□□ 0.01
SHC1-210ENST00000448116 ZRSR1Q15695 479 aaKnown RBP15.1■□□□□ 0.01
SHC1-210ENST00000448116 ZMYM1Q5SVZ6 1142 aa15.1■□□□□ 0.01
SHC1-210ENST00000448116 CEP126Q9P2H0 1117 aa15.1■□□□□ 0.01
SHC1-210ENST00000448116 MAST3O60307 1309 aa15.1■□□□□ 0.01
SHC1-210ENST00000448116 MEGF6O75095 1541 aa15.1■□□□□ 0.01
SHC1-210ENST00000448116 STX1AQ16623 288 aa15.1■□□□□ 0.01
SHC1-210ENST00000448116 NAA16Q6N069 864 aaPredicted RBP15.1■□□□□ 0.01
SHC1-210ENST00000448116 A0A1B0GVL5 298 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 H7C1W4 665 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 EYA2O00167 538 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 DSCC1Q9BVC3 393 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 M0R2C6 588 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 OSBP2Q969R2 916 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 GJB4Q9NTQ9 266 aa15.09■□□□□ 0.01
SHC1-210ENST00000448116 TRMT1Q9NXH9 659 aaKnown RBP15.09■□□□□ 0.01
SHC1-210ENST00000448116 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0.01
SHC1-210ENST00000448116 STK38Q15208 465 aa15.08■□□□□ 0.01
SHC1-210ENST00000448116 TTC39AQ5SRH9 613 aa15.08■□□□□ 0.01
SHC1-210ENST00000448116 AOPEPQ8N6M6 819 aa15.08■□□□□ 0.01
SHC1-210ENST00000448116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.08■□□□□ 0.013e-6■■■□□ 16.2
SHC1-210ENST00000448116 IQCB1Q15051 598 aa15.08■□□□□ 0
SHC1-210ENST00000448116 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0
SHC1-210ENST00000448116 BIN1O00499 593 aa15.08■□□□□ 0
SHC1-210ENST00000448116 CTAGE5O15320 804 aa15.08■□□□□ 0
SHC1-210ENST00000448116 CCDC57Q2TAC2 916 aa15.08■□□□□ 0
SHC1-210ENST00000448116 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.08■□□□□ 0
SHC1-210ENST00000448116 CPLX1O14810 134 aa15.07■□□□□ 0
SHC1-210ENST00000448116 ADORA1P30542 326 aa15.07■□□□□ 0
SHC1-210ENST00000448116 FAM160A1Q05DH4 1040 aa15.07■□□□□ 0
SHC1-210ENST00000448116 NAA30Q147X3 362 aaPredicted RBP15.07■□□□□ 0
SHC1-210ENST00000448116 ANO10Q9NW15 660 aa15.07■□□□□ 0
SHC1-210ENST00000448116 CCDC158Q5M9N0 1113 aa15.07■□□□□ 0
SHC1-210ENST00000448116 KLF18A0A0U1RQI7 1052 aa15.07■□□□□ 0
SHC1-210ENST00000448116 SNW1Q13573 536 aaKnown RBP15.07■□□□□ 0
SHC1-210ENST00000448116 ATP2B3Q16720 1220 aa15.07■□□□□ 0
SHC1-210ENST00000448116 TOM1L2Q6ZVM7 507 aa15.07■□□□□ 0
SHC1-210ENST00000448116 C8orf76Q96K31 380 aa15.07■□□□□ 0
SHC1-210ENST00000448116 PCDHA7Q9UN72 937 aa15.07■□□□□ 0
SHC1-210ENST00000448116 SLIT3O75094 1523 aa15.06■□□□□ 0
SHC1-210ENST00000448116 SKILP12757 684 aa15.06■□□□□ 0
SHC1-210ENST00000448116 U2AF2P26368 475 aaKnown RBP eCLIP15.06■□□□□ 01e-9■■■■■ 30.2
SHC1-210ENST00000448116 ISM2Q6H9L7 571 aa15.06■□□□□ 0
SHC1-210ENST00000448116 CEP57L1Q8IYX8 460 aa15.06■□□□□ 0
SHC1-210ENST00000448116 CCDC112Q8NEF3 446 aa15.06■□□□□ 0
SHC1-210ENST00000448116 GOLGA8BA8MQT2 603 aa15.06■□□□□ 0
SHC1-210ENST00000448116 CAVIN2O95810 425 aa15.06■□□□□ 0
SHC1-210ENST00000448116 PI16Q6UXB8 463 aa15.06■□□□□ 0
SHC1-210ENST00000448116 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
SHC1-210ENST00000448116 C1orf167Q5SNV9 1468 aa15.06■□□□□ 0
SHC1-210ENST00000448116 IMMTQ16891 758 aaKnown RBP15.05■□□□□ 0
SHC1-210ENST00000448116 LRRC8AQ8IWT6 810 aa15.05■□□□□ 0
SHC1-210ENST00000448116 MRPS27Q92552 414 aaKnown RBP15.05■□□□□ 0
SHC1-210ENST00000448116 CLIC4Q9Y696 253 aa15.05■□□□□ 0
SHC1-210ENST00000448116 PRC1O43663 620 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms