RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 MMP10P09238 476 aa13.87□□□□□ -0.19
SMPD4P2-201ENST00000440167 ZAP70P43403 619 aa13.87□□□□□ -0.19
SMPD4P2-201ENST00000440167 GRAPQ13588 217 aa13.87□□□□□ -0.19
SMPD4P2-201ENST00000440167 KBTBD3Q8NAB2 608 aa13.87□□□□□ -0.19
SMPD4P2-201ENST00000440167 GRAPLQ8TC17 118 aaPredicted RBP13.87□□□□□ -0.19
SMPD4P2-201ENST00000440167 RUFY2Q8WXA3 655 aa13.87□□□□□ -0.19
SMPD4P2-201ENST00000440167 RPGRQ92834 1020 aaKnown RBP13.87□□□□□ -0.19
SMPD4P2-201ENST00000440167 ARID4AP29374 1257 aaPredicted RBP13.86□□□□□ -0.19
SMPD4P2-201ENST00000440167 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
SMPD4P2-201ENST00000440167 LSG1Q9H089 658 aaKnown RBP13.86□□□□□ -0.19
SMPD4P2-201ENST00000440167 PARP3Q9Y6F1 533 aa13.86□□□□□ -0.19
SMPD4P2-201ENST00000440167 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
SMPD4P2-201ENST00000440167 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 BCAMP50895 628 aa13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 RBM17Q96I25 401 aaKnown RBP13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 ZNF512BQ96KM6 892 aaPredicted RBP13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 PDGFDQ9GZP0 370 aaPredicted RBP13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 PALD1Q9ULE6 856 aa13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 RAD50Q92878 1312 aa13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
SMPD4P2-201ENST00000440167 PTH1RQ03431 593 aa13.84□□□□□ -0.19
SMPD4P2-201ENST00000440167 UBE4AQ14139 1066 aa13.84□□□□□ -0.19
SMPD4P2-201ENST00000440167 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
SMPD4P2-201ENST00000440167 KIAA1211Q6ZU35 1233 aa13.84□□□□□ -0.19
SMPD4P2-201ENST00000440167 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
SMPD4P2-201ENST00000440167 HMG20BQ9P0W2 317 aa13.84□□□□□ -0.19
SMPD4P2-201ENST00000440167 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 MCCP23508 829 aa13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 KLRK1P26718 216 aa13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 GYG1P46976 350 aa13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 KCNJ4P48050 445 aa13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 RASGRF1Q13972 1273 aa13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 IQSEC3Q9UPP2 1182 aaPredicted RBP13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 LTBP1Q14766 1721 aa13.83□□□□□ -0.2
SMPD4P2-201ENST00000440167 RNF113AO15541 343 aaKnown RBP13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 SPATA5Q8NB90 893 aa13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 TBC1D2Q9BYX2 928 aa13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 PIH1D3Q9NQM4 214 aaKnown RBP13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 COL1A1P02452 1464 aaPredicted RBP13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 KLRG2A4D1S0 409 aaPredicted RBP13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 BECN1Q14457 450 aa13.82□□□□□ -0.2
SMPD4P2-201ENST00000440167 LAMA4Q16363 1823 aa13.81□□□□□ -0.2
SMPD4P2-201ENST00000440167 HOXA10P31260 410 aaPredicted RBP13.81□□□□□ -0.2
SMPD4P2-201ENST00000440167 HSPA4P34932 840 aa13.81□□□□□ -0.2
SMPD4P2-201ENST00000440167 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
SMPD4P2-201ENST00000440167 ZMYM1Q5SVZ6 1142 aa13.81□□□□□ -0.2
SMPD4P2-201ENST00000440167 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
SMPD4P2-201ENST00000440167 ZNF804BA4D1E1 1349 aa13.81□□□□□ -0.2
SMPD4P2-201ENST00000440167 DLEC1Q9Y238 1755 aa13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 MAST3O60307 1309 aa13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 M0R2C6 588 aa13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 EPB41L2O43491 1005 aaKnown RBP13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 GPSM2P81274 684 aa13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 FAM84BQ96KN1 310 aaPredicted RBP13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 GPR101Q96P66 508 aaPredicted RBP13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 SLX4Q8IY92 1834 aa13.8□□□□□ -0.2
SMPD4P2-201ENST00000440167 XDHP47989 1333 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 IDH1O75874 414 aaKnown RBP13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 SRGNP10124 158 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 PDE6BP35913 854 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 RABEP1Q15276 862 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 TTF1Q15361 905 aaPredicted RBP13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 CAVIN4Q5BKX8 364 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 VPS37DQ86XT2 251 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 HELLSQ9NRZ9 838 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 RBM8AQ9Y5S9 174 aaKnown RBP13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 MAST2Q6P0Q8 1798 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 IRS2Q9Y4H2 1338 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 PPEF1O14829 653 aaPredicted RBP13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 NPR1P16066 1061 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 WASHC4Q2M389 1173 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 OSBP2Q969R2 916 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 WWC3Q9ULE0 1092 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 SNX14Q9Y5W7 946 aa13.79□□□□□ -0.2
SMPD4P2-201ENST00000440167 BBOX1O75936 387 aa13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 ZFYP08048 801 aaPredicted RBP13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 FBXO33Q7Z6M2 555 aa13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 MAP4K1Q92918 833 aa13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 CHD4Q14839 1912 aa13.78□□□□□ -0.2
SMPD4P2-201ENST00000440167 DUOX1Q9NRD9 1551 aa13.77□□□□□ -0.21
SMPD4P2-201ENST00000440167 ADD2P35612 726 aa13.77□□□□□ -0.21
SMPD4P2-201ENST00000440167 ANAPC15P60006 121 aa13.77□□□□□ -0.21
SMPD4P2-201ENST00000440167 SLC9C2Q5TAH2 1124 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms