RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 SEC31BQ9NQW1 1179 aa9.4□□□□□ -0.91
APP-209ENST00000440126 IQSEC3Q9UPP2 1182 aaPredicted RBP9.4□□□□□ -0.91
APP-209ENST00000440126 BCL9O00512 1426 aa9.39□□□□□ -0.91
APP-209ENST00000440126 TERF1P54274 439 aa9.39□□□□□ -0.91
APP-209ENST00000440126 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
APP-209ENST00000440126 MCMDC2Q4G0Z9 681 aa9.39□□□□□ -0.91
APP-209ENST00000440126 TTLL11Q8NHH1 800 aa9.39□□□□□ -0.91
APP-209ENST00000440126 DENND2AQ9ULE3 1009 aa9.39□□□□□ -0.91
APP-209ENST00000440126 ABCC6O95255 1503 aa9.39□□□□□ -0.91
APP-209ENST00000440126 HIP1O00291 1037 aa9.39□□□□□ -0.91
APP-209ENST00000440126 MRE11P49959 708 aa9.39□□□□□ -0.91
APP-209ENST00000440126 CCT2P78371 535 aaKnown RBP9.39□□□□□ -0.91
APP-209ENST00000440126 Q6ZUG5 572 aa9.39□□□□□ -0.91
APP-209ENST00000440126 CDC37L1Q7L3B6 337 aa9.39□□□□□ -0.91
APP-209ENST00000440126 MTERF4Q7Z6M4 381 aaKnown RBP9.39□□□□□ -0.91
APP-209ENST00000440126 ZBTB38Q8NAP3 1195 aaPredicted RBP9.39□□□□□ -0.91
APP-209ENST00000440126 BRF1Q92994 677 aa9.39□□□□□ -0.91
APP-209ENST00000440126 OSBP2Q969R2 916 aa9.39□□□□□ -0.91
APP-209ENST00000440126 INTS4Q96HW7 963 aaKnown RBP9.39□□□□□ -0.91
APP-209ENST00000440126 RBSNQ9H1K0 784 aa9.39□□□□□ -0.91
APP-209ENST00000440126 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
APP-209ENST00000440126 MAST3O60307 1309 aa9.39□□□□□ -0.91
APP-209ENST00000440126 PCCAP05165 728 aaPredicted RBP9.38□□□□□ -0.91
APP-209ENST00000440126 RPS6KB1P23443 525 aa9.38□□□□□ -0.91
APP-209ENST00000440126 CLEC17AQ6ZS10 378 aa9.38□□□□□ -0.91
APP-209ENST00000440126 NCOA5Q9HCD5 579 aaKnown RBP9.38□□□□□ -0.91
APP-209ENST00000440126 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
APP-209ENST00000440126 CRKLP46109 303 aaKnown RBP9.38□□□□□ -0.91
APP-209ENST00000440126 SUSD4Q5VX71 490 aa9.38□□□□□ -0.91
APP-209ENST00000440126 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
APP-209ENST00000440126 WDR33Q9C0J8 1336 aaKnown RBP9.38□□□□□ -0.91
APP-209ENST00000440126 IDH1O75874 414 aaKnown RBP9.37□□□□□ -0.91
APP-209ENST00000440126 CEBPZQ03701 1054 aaKnown RBP9.37□□□□□ -0.91
APP-209ENST00000440126 APOBRQ0VD83 1088 aa9.37□□□□□ -0.91
APP-209ENST00000440126 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
APP-209ENST00000440126 RNF20Q5VTR2 975 aa9.37□□□□□ -0.91
APP-209ENST00000440126 NEK1Q96PY6 1258 aa9.37□□□□□ -0.91
APP-209ENST00000440126 PUS7LQ9H0K6 701 aaKnown RBP9.37□□□□□ -0.91
APP-209ENST00000440126 COL16A1Q07092 1604 aaPredicted RBP9.37□□□□□ -0.91
APP-209ENST00000440126 PAPPAQ13219 1627 aa9.37□□□□□ -0.91
APP-209ENST00000440126 LOC102724428A0A0B4J2F2 783 aa9.37□□□□□ -0.91
APP-209ENST00000440126 PHKA1P46020 1223 aa9.37□□□□□ -0.91
APP-209ENST00000440126 NASPP49321 788 aaPredicted RBP9.37□□□□□ -0.91
APP-209ENST00000440126 CTSWP56202 376 aa9.37□□□□□ -0.91
APP-209ENST00000440126 SIK1P57059 783 aa9.37□□□□□ -0.91
APP-209ENST00000440126 GUCY1B3Q02153 619 aa9.37□□□□□ -0.91
APP-209ENST00000440126 CCDC158Q5M9N0 1113 aa9.37□□□□□ -0.91
APP-209ENST00000440126 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
APP-209ENST00000440126 SLC51AQ86UW1 340 aa9.37□□□□□ -0.91
APP-209ENST00000440126 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
APP-209ENST00000440126 MTMR6Q9Y217 621 aa9.37□□□□□ -0.91
APP-209ENST00000440126 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.37□□□□□ -0.91
APP-209ENST00000440126 DISP2A7MBM2 1401 aa9.37□□□□□ -0.91
APP-209ENST00000440126 SPATA31A1Q5TZJ5 1347 aa9.37□□□□□ -0.91
APP-209ENST00000440126 F13A1P00488 732 aa9.37□□□□□ -0.91
APP-209ENST00000440126 HSPD1P10809 573 aaKnown RBP9.37□□□□□ -0.91
APP-209ENST00000440126 MCAMP43121 646 aa9.37□□□□□ -0.91
APP-209ENST00000440126 INTS5Q6P9B9 1019 aaKnown RBP9.37□□□□□ -0.91
APP-209ENST00000440126 FAM43BQ6ZT52 329 aaPredicted RBP9.37□□□□□ -0.91
APP-209ENST00000440126 INCENPQ9NQS7 918 aa9.37□□□□□ -0.91
APP-209ENST00000440126 APPP05067 770 aa9.36□□□□□ -0.91
APP-209ENST00000440126 PSMA5P28066 241 aa9.36□□□□□ -0.91
APP-209ENST00000440126 DOT1LQ8TEK3 1739 aa9.36□□□□□ -0.91
APP-209ENST00000440126 ANKRD18BA2A2Z9 1011 aa9.36□□□□□ -0.91
APP-209ENST00000440126 RNF113AO15541 343 aaKnown RBP9.36□□□□□ -0.91
APP-209ENST00000440126 KCNB2Q92953 911 aa9.36□□□□□ -0.91
APP-209ENST00000440126 IL17RAQ96F46 866 aa9.36□□□□□ -0.91
APP-209ENST00000440126 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
APP-209ENST00000440126 TEX13AQ9BXU3 409 aaPredicted RBP9.36□□□□□ -0.91
APP-209ENST00000440126 GTPBP4Q9BZE4 634 aaKnown RBP9.36□□□□□ -0.91
APP-209ENST00000440126 NIP7Q9Y221 180 aaKnown RBP eCLIP9.36□□□□□ -0.91
APP-209ENST00000440126 MYO5AQ9Y4I1 1855 aaKnown RBP9.35□□□□□ -0.91
APP-209ENST00000440126 RIC1Q4ADV7 1423 aa9.35□□□□□ -0.91
APP-209ENST00000440126 ZMYM1Q5SVZ6 1142 aa9.35□□□□□ -0.91
APP-209ENST00000440126 C3orf67Q6ZVT6 689 aa9.35□□□□□ -0.91
APP-209ENST00000440126 TM6SF1Q9BZW5 370 aa9.35□□□□□ -0.91
APP-209ENST00000440126 PIH1D3Q9NQM4 214 aaKnown RBP9.35□□□□□ -0.91
APP-209ENST00000440126 RIPOR2Q9Y4F9 1068 aa9.35□□□□□ -0.91
APP-209ENST00000440126 SLIT2O94813 1529 aa9.35□□□□□ -0.91
APP-209ENST00000440126 UBAP1LF5GYI3 381 aa9.35□□□□□ -0.91
APP-209ENST00000440126 CSF1RP07333 972 aa9.35□□□□□ -0.91
APP-209ENST00000440126 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■□□□□ 11.1
APP-209ENST00000440126 CCDC87Q9NVE4 849 aa9.35□□□□□ -0.91
APP-209ENST00000440126 MYH14Q7Z406 1995 aaKnown RBP9.34□□□□□ -0.91
APP-209ENST00000440126 FOXP2O15409 715 aa9.34□□□□□ -0.91
APP-209ENST00000440126 OFD1O75665 1012 aa9.34□□□□□ -0.91
APP-209ENST00000440126 LETM1O95202 739 aaPredicted RBP9.34□□□□□ -0.91
APP-209ENST00000440126 RXRAP19793 462 aa9.34□□□□□ -0.91
APP-209ENST00000440126 FAM193AP78312 1265 aa9.34□□□□□ -0.91
APP-209ENST00000440126 OTUD7BQ6GQQ9 843 aa9.34□□□□□ -0.91
APP-209ENST00000440126 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
APP-209ENST00000440126 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
APP-209ENST00000440126 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
APP-209ENST00000440126 NUP98P52948 1817 aa9.34□□□□□ -0.91
APP-209ENST00000440126 TAF1P21675 1872 aa9.34□□□□□ -0.91
APP-209ENST00000440126 E7EWF7 191 aa9.34□□□□□ -0.91
APP-209ENST00000440126 CIAO1O76071 339 aa9.34□□□□□ -0.91
APP-209ENST00000440126 SCRN1Q12765 414 aa9.34□□□□□ -0.91
APP-209ENST00000440126 SLC9C2Q5TAH2 1124 aa9.34□□□□□ -0.91
APP-209ENST00000440126 TAF3Q5VWG9 929 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms