RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 MPHOSPH6Q99547 160 aaKnown RBP12.5□□□□□ -0.41
CCDC171-202ENST00000432954 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.5□□□□□ -0.41
CCDC171-202ENST00000432954 EXOC1Q9NV70 894 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 MKS1Q9NXB0 559 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 CEP104O60308 925 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 INHBCP55103 352 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 ARHGAP29Q52LW3 1261 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 CAPRIN2Q6IMN6 1127 aaKnown RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 ANKK1Q8NFD2 765 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 GIMAP1Q8WWP7 306 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 RUFY1Q96T51 708 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 COMMD10Q9Y6G5 202 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 EZRP15311 586 aaKnown RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 FNTAP49354 379 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 USP11P51784 963 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 GNAI1P63096 354 aa12.49□□□□□ -0.41
CCDC171-202ENST00000432954 RPAP2Q8IXW5 612 aaPredicted RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 RNF168Q8IYW5 571 aaPredicted RBP12.49□□□□□ -0.41
CCDC171-202ENST00000432954 SOGA1O94964 1423 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 BICDL2A1A5D9 508 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 CYP27B1O15528 508 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 BBOX1O75936 387 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 TRIM37O94972 964 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 FSBPO95073 299 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 CAVIN2O95810 425 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 PDE4BQ07343 736 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 BTG3Q14201 252 aaPredicted RBP12.48□□□□□ -0.41
CCDC171-202ENST00000432954 MIS18BP1Q6P0N0 1132 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 PEX5LQ8IYB4 626 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 KCND1Q9NSA2 647 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 UBAP1Q9NZ09 502 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
CCDC171-202ENST00000432954 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 INPP5BP32019 993 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 CCDC93Q567U6 631 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 CCDC158Q5M9N0 1113 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 RSPH9Q9H1X1 276 aaPredicted RBP12.47□□□□□ -0.41
CCDC171-202ENST00000432954 GINM1Q9NU53 330 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 CORO1CQ9ULV4 474 aaPredicted RBP12.47□□□□□ -0.41
CCDC171-202ENST00000432954 SETD1BQ9UPS6 1966 aaKnown RBP12.47□□□□□ -0.41
CCDC171-202ENST00000432954 BLMP54132 1417 aaPredicted RBP12.47□□□□□ -0.41
CCDC171-202ENST00000432954 LIN7AO14910 233 aaPredicted RBP12.47□□□□□ -0.41
CCDC171-202ENST00000432954 MBD4O95243 580 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 ZNF132P52740 706 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 CC2D1AQ6P1N0 951 aaPredicted RBP12.47□□□□□ -0.41
CCDC171-202ENST00000432954 CEP112Q8N8E3 955 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
CCDC171-202ENST00000432954 DDX20Q9UHI6 824 aaKnown RBP12.47□□□□□ -0.41
CCDC171-202ENST00000432954 TRIM21P19474 475 aaKnown RBP12.46□□□□□ -0.41
CCDC171-202ENST00000432954 CUL3Q13618 768 aa12.46□□□□□ -0.41
CCDC171-202ENST00000432954 COL19A1Q14993 1142 aa12.46□□□□□ -0.41
CCDC171-202ENST00000432954 VPS37AQ8NEZ2 397 aa12.46□□□□□ -0.41
CCDC171-202ENST00000432954 FUT8Q9BYC5 575 aa12.46□□□□□ -0.41
CCDC171-202ENST00000432954 TUBGCP4Q9UGJ1 667 aa12.46□□□□□ -0.41
CCDC171-202ENST00000432954 ITGB1BP2Q9UKP3 347 aa12.46□□□□□ -0.41
CCDC171-202ENST00000432954 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
CCDC171-202ENST00000432954 RPAP1Q9BWH6 1393 aaPredicted RBP12.46□□□□□ -0.42
CCDC171-202ENST00000432954 H3BQF6 201 aa12.46□□□□□ -0.42
CCDC171-202ENST00000432954 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.42
CCDC171-202ENST00000432954 GALNT15Q8N3T1 639 aa12.46□□□□□ -0.42
CCDC171-202ENST00000432954 GBP7Q8N8V2 638 aaPredicted RBP12.46□□□□□ -0.42
CCDC171-202ENST00000432954 MIGA1Q8NAN2 632 aa12.46□□□□□ -0.42
CCDC171-202ENST00000432954 PAPOLBQ9NRJ5 636 aaKnown RBP12.46□□□□□ -0.42
CCDC171-202ENST00000432954 BOLA2-SMG1P6H3BVE0 249 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SRGAP3O43295 1099 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 TUBB4AP04350 444 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 MSL3P1P0C860 447 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 ENPP1P22413 925 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 PTGS1P23219 599 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 PPP4CP60510 307 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SLC43A3Q8NBI5 491 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SLC39A2Q9NP94 309 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 NSFL1CQ9UNZ2 370 aaKnown RBP12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 FRMD3A2A2Y4 597 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 APBB1O00213 710 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 KIF3BO15066 747 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SMNDC1O75940 238 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC171-202ENST00000432954 TGFB3P10600 412 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
CCDC171-202ENST00000432954 DESP17661 470 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 CUL4BQ13620 913 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SMUG1Q53HV7 270 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SH3GL1Q99961 368 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 TUBA8Q9NY65 449 aaPredicted RBP12.45□□□□□ -0.42
CCDC171-202ENST00000432954 PHF24Q9UPV7 400 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 GMEB1Q9Y692 573 aa12.45□□□□□ -0.42
CCDC171-202ENST00000432954 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 MAP2K7O14733 419 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 FOSL1P15407 271 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms