RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 DNM2P50570 870 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 RNF214Q8ND24 703 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 ZNF644Q9H582 1327 aaPredicted RBP6.51□□□□□ -1.37
HERC4-206ENST00000427635 MAGEB6P1A0A0J9YX57 407 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 NBPF9Q3BBW0 867 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 SP4Q02446 784 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 KANK3Q6NY19 840 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 DZIP3Q86Y13 1208 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 DNAAF4Q8WXU2 420 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 TSR2Q969E8 191 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 CALR3Q96L12 384 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 PPP1R9BQ96SB3 815 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 PRKRIP1Q9H875 184 aaPredicted RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 KLHL42Q9P2K6 505 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 MAP3K2Q9Y2U5 619 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 SLC4A4Q9Y6R1 1079 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 IL2RBP14784 551 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 NAPAP54920 295 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 RNF187Q5TA31 235 aaPredicted RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 CCDC63Q8NA47 563 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 CNBD1Q8NA66 436 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 CNNM3Q8NE01 707 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 SLC12A5Q9H2X9 1139 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 AZI2Q9H6S1 392 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 CCNL1Q9UK58 526 aaPredicted RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 BCS1LQ9Y276 419 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 TTC21BQ7Z4L5 1316 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 TNRQ92752 1358 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 A0A1W2PRG0 241 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 EEF2P13639 858 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 SMC1BQ8NDV3 1235 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 CNNM2Q9H8M5 875 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 ABT1Q9ULW3 272 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 DAPK3O43293 454 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 LDHBP07195 334 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 STRN3Q13033 797 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 GSTA5Q7RTV2 222 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 RPAP2Q8IXW5 612 aaPredicted RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 CCDC144CPQ8IYA2 1237 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 CCDC114Q96M63 670 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 CRACR2AQ9BSW2 395 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 MIS18AQ9NYP9 233 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 RASAL2Q9UJF2 1139 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 USP21Q9UK80 565 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 PRKG1Q13976 671 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 WTAPQ15007 396 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 HS1BP3Q53T59 392 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 WAPLQ7Z5K2 1190 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 MSL3Q8N5Y2 521 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 CCDC102AQ96A19 550 aa6.5□□□□□ -1.37
HERC4-206ENST00000427635 NSFL1CQ9UNZ2 370 aaKnown RBP6.5□□□□□ -1.37
HERC4-206ENST00000427635 METAP2P50579 478 aaKnown RBP eCLIP6.49□□□□□ -1.37
HERC4-206ENST00000427635 TPD52P55327 224 aaPredicted RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 FLAD1Q8NFF5 587 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 NCOA7Q8NI08 942 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 IFT74Q96LB3 600 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 PFDN4Q9NQP4 134 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 BRD4O60885 1362 aaPredicted RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 SYNJ1O43426 1573 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 ZSCAN12O43309 604 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 OATP04181 439 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 DNA2P51530 1060 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 RAB3GAP1Q15042 981 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 ZNF772Q68DY9 489 aaPredicted RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 RSPH3Q86UC2 560 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 USP48Q86UV5 1035 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 ESR2Q92731 530 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 RIOK1Q9BRS2 568 aaKnown RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 RTEL1Q9NZ71 1219 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 FEZ2Q9UHY8 353 aaPredicted RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 IARSP41252 1262 aaKnown RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 KIAA0753Q2KHM9 967 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 ATP2A1O14983 1001 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 WDR44Q5JSH3 913 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 MKRN1Q9UHC7 482 aaKnown RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 LRFN2Q9ULH4 789 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 DENND4BO75064 1496 aaPredicted RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 CCDC66A2RUB6 948 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 SETSIPP0DME0 302 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 ALDH1B1P30837 517 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 MCM10Q7L590 875 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 KIFC2Q96AC6 838 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 CCDC8Q9H0W5 538 aaPredicted RBP6.49□□□□□ -1.37
HERC4-206ENST00000427635 IRAK4Q9NWZ3 460 aa6.49□□□□□ -1.37
HERC4-206ENST00000427635 CAMSAP2Q08AD1 1489 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 SHTN1A0MZ66 631 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 ATP2A2P16615 1042 aaKnown RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 GJC1P36383 396 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 TTC6Q86TZ1 520 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 WDR75Q8IWA0 830 aaKnown RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 CCDC155Q8N6L0 562 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 SLC26A6Q9BXS9 759 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 ANO10Q9NW15 660 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 RTL9Q8NET4 1388 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 FGD6Q6ZV73 1430 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 ADGRL1O94910 1474 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 KIF11P52732 1056 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 GSE1Q14687 1217 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms