RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 GJA5P36382 358 aa12.21□□□□□ -0.45
LSG1-202ENST00000427461 EIF4A1P60842 406 aaKnown RBP12.21□□□□□ -0.45
LSG1-202ENST00000427461 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
LSG1-202ENST00000427461 MTFR1Q15390 333 aa12.21□□□□□ -0.45
LSG1-202ENST00000427461 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
LSG1-202ENST00000427461 DEFB123Q8N688 67 aa12.21□□□□□ -0.45
LSG1-202ENST00000427461 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
LSG1-202ENST00000427461 UFL1O94874 794 aa12.2□□□□□ -0.46
LSG1-202ENST00000427461 ZBTB48P10074 688 aaPredicted RBP12.2□□□□□ -0.46
LSG1-202ENST00000427461 STAP2Q9UGK3 403 aa12.2□□□□□ -0.46
LSG1-202ENST00000427461 STXBP5LQ9Y2K9 1186 aa12.2□□□□□ -0.46
LSG1-202ENST00000427461 A0A1W2PPC1 479 aa12.19□□□□□ -0.46
LSG1-202ENST00000427461 HSPA5P11021 654 aaKnown RBP12.19□□□□□ -0.46
LSG1-202ENST00000427461 PDIA6Q15084 440 aa12.19□□□□□ -0.46
LSG1-202ENST00000427461 NECTIN2Q92692 538 aa12.19□□□□□ -0.46
LSG1-202ENST00000427461 ARHGAP39Q9C0H5 1083 aa12.19□□□□□ -0.46
LSG1-202ENST00000427461 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 SF3B3Q15393 1217 aaKnown RBP12.18□□□□□ -0.46
LSG1-202ENST00000427461 OTUD7BQ6GQQ9 843 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 UBE2Q1Q7Z7E8 422 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.18□□□□□ -0.46
LSG1-202ENST00000427461 PODXL2Q9NZ53 605 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 NR2E3Q9Y5X4 410 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 ZNF646O15015 1829 aaPredicted RBP12.18□□□□□ -0.46
LSG1-202ENST00000427461 SSC5DA1L4H1 1573 aa12.18□□□□□ -0.46
LSG1-202ENST00000427461 ECM2O94769 699 aaPredicted RBP12.17□□□□□ -0.46
LSG1-202ENST00000427461 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
LSG1-202ENST00000427461 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
LSG1-202ENST00000427461 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
LSG1-202ENST00000427461 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
LSG1-202ENST00000427461 FAM89AQ96GI7 184 aa12.17□□□□□ -0.46
LSG1-202ENST00000427461 HTATIP2Q9BUP3 242 aa12.17□□□□□ -0.46
LSG1-202ENST00000427461 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
LSG1-202ENST00000427461 ANKIB1Q9P2G1 1089 aa12.17□□□□□ -0.46
LSG1-202ENST00000427461 GGA1Q9UJY5 639 aa12.17□□□□□ -0.46
LSG1-202ENST00000427461 SPTBN5Q9NRC6 3674 aaKnown RBP12.16□□□□□ -0.46
LSG1-202ENST00000427461 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
LSG1-202ENST00000427461 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
LSG1-202ENST00000427461 HSP90AB3PQ58FF7 597 aa12.16□□□□□ -0.46
LSG1-202ENST00000427461 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
LSG1-202ENST00000427461 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
LSG1-202ENST00000427461 MTMR10Q9NXD2 777 aa12.16□□□□□ -0.46
LSG1-202ENST00000427461 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
LSG1-202ENST00000427461 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 DACT2Q5SW24 774 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
LSG1-202ENST00000427461 OGFOD1Q8N543 542 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 FBXW7Q969H0 707 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 EYSQ5T1H1 3165 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
LSG1-202ENST00000427461 PER1O15534 1290 aaPredicted RBP12.14□□□□□ -0.47
LSG1-202ENST00000427461 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
LSG1-202ENST00000427461 TAF1CQ15572 869 aaPredicted RBP12.14□□□□□ -0.47
LSG1-202ENST00000427461 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
LSG1-202ENST00000427461 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
LSG1-202ENST00000427461 DEFB129Q9H1M3 183 aa12.14□□□□□ -0.47
LSG1-202ENST00000427461 PPP1R12BO60237 982 aaPredicted RBP12.13□□□□□ -0.47
LSG1-202ENST00000427461 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
LSG1-202ENST00000427461 GJA8P48165 433 aa12.13□□□□□ -0.47
LSG1-202ENST00000427461 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.47
LSG1-202ENST00000427461 GPR153Q6NV75 609 aa12.13□□□□□ -0.47
LSG1-202ENST00000427461 PNISRQ8TF01 805 aaKnown RBP12.13□□□□□ -0.47
LSG1-202ENST00000427461 BRI3BPQ8WY22 251 aa12.13□□□□□ -0.47
LSG1-202ENST00000427461 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
LSG1-202ENST00000427461 ZFYVE28Q9HCC9 887 aa12.13□□□□□ -0.47
LSG1-202ENST00000427461 RAPGEFL1Q9UHV5 662 aa12.13□□□□□ -0.47
LSG1-202ENST00000427461 ATP5J2-PTCD1G3V325 749 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 EVI5O60447 810 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 USP2O75604 605 aaPredicted RBP12.12□□□□□ -0.47
LSG1-202ENST00000427461 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
LSG1-202ENST00000427461 KIAA0825Q8IV33 1275 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 OPTNQ96CV9 577 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 ZBED3Q96IU2 234 aaPredicted RBP12.12□□□□□ -0.47
LSG1-202ENST00000427461 ELP3Q9H9T3 547 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 PCDHAC2Q9Y5I4 1007 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 OTOFQ9HC10 1997 aa12.12□□□□□ -0.47
LSG1-202ENST00000427461 ALPK3Q96L96 1907 aa12.11□□□□□ -0.47
LSG1-202ENST00000427461 FARP2O94887 1054 aaPredicted RBP12.11□□□□□ -0.47
LSG1-202ENST00000427461 GJB1P08034 283 aa12.11□□□□□ -0.47
LSG1-202ENST00000427461 CCL5P13501 91 aa12.11□□□□□ -0.47
LSG1-202ENST00000427461 COL9A1P20849 921 aa12.11□□□□□ -0.47
LSG1-202ENST00000427461 CTGFP29279 349 aa12.11□□□□□ -0.47
LSG1-202ENST00000427461 BCAMP50895 628 aa12.11□□□□□ -0.47
LSG1-202ENST00000427461 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
LSG1-202ENST00000427461 NBPF12Q5TAG4 269 aaPredicted RBP12.11□□□□□ -0.47
LSG1-202ENST00000427461 NKX2-3Q8TAU0 364 aa12.11□□□□□ -0.47
LSG1-202ENST00000427461 CCL15-CCL14A0A0B4J2E2 113 aa12.1□□□□□ -0.47
LSG1-202ENST00000427461 IRS4O14654 1257 aaPredicted RBP12.1□□□□□ -0.47
LSG1-202ENST00000427461 CCL15Q16663 113 aa12.1□□□□□ -0.47
LSG1-202ENST00000427461 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
LSG1-202ENST00000427461 GDF15Q99988 308 aa12.1□□□□□ -0.47
LSG1-202ENST00000427461 RNF208Q9H0X6 261 aa12.1□□□□□ -0.47
LSG1-202ENST00000427461 COL1A1P02452 1464 aaPredicted RBP12.09□□□□□ -0.47
LSG1-202ENST00000427461 KIF22Q14807 665 aa12.09□□□□□ -0.47
LSG1-202ENST00000427461 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms