RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 UBE2Q2LH0YL09 131 aa15.71■□□□□ 0.1
MCF2L-213ENST00000421756 GNL2Q13823 731 aaKnown RBP15.71■□□□□ 0.1
MCF2L-213ENST00000421756 ATP2B3Q16720 1220 aa15.71■□□□□ 0.1
MCF2L-213ENST00000421756 PTPN21Q16825 1174 aa15.71■□□□□ 0.1
MCF2L-213ENST00000421756 CMTR1Q8N1G2 835 aaKnown RBP15.71■□□□□ 0.1
MCF2L-213ENST00000421756 FGAP02671 866 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 PTGS1P23219 599 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 KRT32Q14532 448 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 RABL6Q3YEC7 729 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-213ENST00000421756 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-213ENST00000421756 ZNF592Q92610 1267 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 USP28Q96RU2 1077 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 CHD2O14647 1828 aaKnown RBP15.7■□□□□ 0.1
MCF2L-213ENST00000421756 A0A1B0GVL5 298 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 MARCKSP29966 332 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-213ENST00000421756 HSP90AA4PQ58FG1 418 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 MED23Q9ULK4 1368 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 MST1RQ04912 1400 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 OFD1O75665 1012 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 TCIRG1Q13488 830 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 NFXL1Q6ZNB6 911 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 PIBF1Q8WXW3 757 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 HMG20BQ9P0W2 317 aa15.7■□□□□ 0.1
MCF2L-213ENST00000421756 NCAPD2Q15021 1401 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 IRS4O14654 1257 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-213ENST00000421756 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 CCAR1Q8IX12 1150 aaKnown RBP15.69■□□□□ 0.1
MCF2L-213ENST00000421756 MIGA1Q8NAN2 632 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 SDF4Q9BRK5 362 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 WTIPA6NIX2 430 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-213ENST00000421756 STARD3NLO95772 234 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 NKX2-3Q8TAU0 364 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 PHKBQ93100 1093 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.69■□□□□ 0.18e-8■□□□□ 11.2
MCF2L-213ENST00000421756 LRRC37A3O60309 1634 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 SEC31BQ9NQW1 1179 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 ABCF2Q9UG63 623 aa15.69■□□□□ 0.1
MCF2L-213ENST00000421756 PRC1O43663 620 aa15.68■□□□□ 0.1
MCF2L-213ENST00000421756 PHKA1P46020 1223 aa15.68■□□□□ 0.1
MCF2L-213ENST00000421756 GPAA1O43292 621 aa15.68■□□□□ 0.1
MCF2L-213ENST00000421756 ZNF165P49910 485 aa15.68■□□□□ 0.1
MCF2L-213ENST00000421756 FAM182BQ5T319 152 aa15.68■□□□□ 0.1
MCF2L-213ENST00000421756 PYCARDQ9ULZ3 195 aa15.68■□□□□ 0.1
MCF2L-213ENST00000421756 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
MCF2L-213ENST00000421756 MED1Q15648 1581 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-213ENST00000421756 CTDNEP1O95476 244 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 ADD1P35611 737 aaKnown RBP15.67■□□□□ 0.1
MCF2L-213ENST00000421756 CCDC186Q7Z3E2 898 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
MCF2L-213ENST00000421756 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-213ENST00000421756 SENP2Q9HC62 589 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 ZNF213O14771 459 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 BECN2A8MW95 431 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 B4E1Z4 1266 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 IMMTQ16891 758 aaKnown RBP15.67■□□□□ 0.1
MCF2L-213ENST00000421756 FSIP1Q8NA03 581 aa15.67■□□□□ 0.1
MCF2L-213ENST00000421756 PDIA3P30101 505 aaKnown RBP15.66■□□□□ 0.1
MCF2L-213ENST00000421756 ORC3Q9UBD5 711 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-213ENST00000421756 MRVI1Q9Y6F6 885 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 TNS3Q68CZ2 1445 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 MCAMP43121 646 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 ARID5BQ14865 1188 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 SPECC1Q5M775 1068 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 ZMYM1Q5SVZ6 1142 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 DZIP3Q86Y13 1208 aaKnown RBP15.66■□□□□ 0.1
MCF2L-213ENST00000421756 VSIG10Q8N0Z9 540 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 hCG_1642624A0A1W2PR95 340 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 CTDSPL2Q05D32 466 aa15.66■□□□□ 0.1
MCF2L-213ENST00000421756 ZRSR1Q15695 479 aaKnown RBP15.66■□□□□ 0.1
MCF2L-213ENST00000421756 TRDNQ13061 729 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 NOLC1Q14978 699 aaKnown RBP eCLIP15.65■□□□□ 0.13e-6■■■■■ 34
MCF2L-213ENST00000421756 STK38Q15208 465 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 CCDC73Q6ZRK6 1079 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 WWC3Q9ULE0 1092 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 GOLGA6L19H0YKK7 550 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 C16orf45Q96MC5 204 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-213ENST00000421756 ANKRD18BA2A2Z9 1011 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 EXOC5O00471 708 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 GTF2E1P29083 439 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-213ENST00000421756 C8orf76Q96K31 380 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 SLC4A9Q96Q91 983 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 MPHOSPH8Q99549 860 aa15.65■□□□□ 0.1
MCF2L-213ENST00000421756 GOLPH3LQ9H4A5 285 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 PRKAB2O43741 272 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 KINO60870 393 aaKnown RBP15.64■□□□□ 0.09
MCF2L-213ENST00000421756 NUP133Q8WUM0 1156 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 PIH1D3Q9NQM4 214 aaKnown RBP15.64■□□□□ 0.09
MCF2L-213ENST00000421756 MINDY4BA8MYZ0 360 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 SMIM22K7EJ46 135 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 RESTQ13127 1097 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 C11orf57Q6ZUT1 292 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-213ENST00000421756 AIDAQ96BJ3 306 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 CLIC4Q9Y696 253 aa15.64■□□□□ 0.09
MCF2L-213ENST00000421756 NPHP1O15259 732 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 325.1 ms