RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
TMEM50B-201ENST00000420455 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 MCMDC2Q4G0Z9 681 aa16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 ZNF589Q86UQ0 364 aaPredicted RBP16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 MINPP1Q9UNW1 487 aa16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 FLAD1Q8NFF5 587 aa16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 CELF1Q92879 486 aaKnown RBP16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 UBE4AQ14139 1066 aa16.13■□□□□ 0.17
TMEM50B-201ENST00000420455 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 RNF113AO15541 343 aaKnown RBP16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 GORABQ5T7V8 394 aa16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 ZAP70P43403 619 aa16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 PHKA1P46020 1223 aa16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 HELBQ8NG08 1087 aaPredicted RBP16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
TMEM50B-201ENST00000420455 LTBP1Q14766 1721 aa16.11■□□□□ 0.17
TMEM50B-201ENST00000420455 DDR1Q08345 913 aa16.11■□□□□ 0.17
TMEM50B-201ENST00000420455 CYP2E1P05181 493 aaPredicted RBP16.11■□□□□ 0.17
TMEM50B-201ENST00000420455 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
TMEM50B-201ENST00000420455 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
TMEM50B-201ENST00000420455 RPAP1Q9BWH6 1393 aaPredicted RBP16.11■□□□□ 0.17
TMEM50B-201ENST00000420455 SERPINB2P05120 415 aa16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 DEKP35659 375 aaKnown RBP16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 LRRFIP1Q32MZ4 808 aaKnown RBP16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 COL23A1Q86Y22 540 aaPredicted RBP16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 CAMKK2Q96RR4 588 aa16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 ST18O60284 1047 aa16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 CHGBP05060 677 aa16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 MCM2P49736 904 aa16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 TTC14Q96N46 770 aa16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 HMG20BQ9P0W2 317 aa16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 RBM8AQ9Y5S9 174 aaKnown RBP16.1■□□□□ 0.17
TMEM50B-201ENST00000420455 DSCC1Q9BVC3 393 aa16.09■□□□□ 0.17
TMEM50B-201ENST00000420455 PNPLA7Q6ZV29 1317 aa16.09■□□□□ 0.17
TMEM50B-201ENST00000420455 HOXA10P31260 410 aaPredicted RBP16.09■□□□□ 0.17
TMEM50B-201ENST00000420455 GRAPQ13588 217 aa16.09■□□□□ 0.17
TMEM50B-201ENST00000420455 GRAPLQ8TC17 118 aaPredicted RBP16.09■□□□□ 0.17
TMEM50B-201ENST00000420455 ANKRD2Q9GZV1 360 aa16.09■□□□□ 0.17
TMEM50B-201ENST00000420455 PDS5AQ29RF7 1337 aaKnown RBP16.09■□□□□ 0.17
TMEM50B-201ENST00000420455 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.17
TMEM50B-201ENST00000420455 CREB3L3Q68CJ9 461 aa16.08■□□□□ 0.17
TMEM50B-201ENST00000420455 PI16Q6UXB8 463 aa16.08■□□□□ 0.17
TMEM50B-201ENST00000420455 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.17
TMEM50B-201ENST00000420455 MAST3O60307 1309 aa16.08■□□□□ 0.17
TMEM50B-201ENST00000420455 SLC27A2O14975 620 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 SPATA5Q8NB90 893 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 ST5P78524 1137 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 RASGRF1Q13972 1273 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 ZSWIM6Q9HCJ5 1215 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
TMEM50B-201ENST00000420455 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 SNAP23O00161 211 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 ADD2P35612 726 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 UBE3CQ15386 1083 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 OSBP2Q969R2 916 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 ALDH8A1Q9H2A2 487 aaPredicted RBP16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 KIAA1551Q9HCM1 1747 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 COL1A1P02452 1464 aaPredicted RBP16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 FBXO33Q7Z6M2 555 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 APPBP2Q92624 585 aa16.07■□□□□ 0.16
TMEM50B-201ENST00000420455 NEK4P51957 841 aa16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 M0R2C6 588 aa16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 FOXP2O15409 715 aa16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 BCAMP50895 628 aa16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 C15orf52Q6ZUT6 534 aaKnown RBP16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 MYH13Q9UKX3 1938 aa16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 COL11A2P13942 1736 aaPredicted RBP16.06■□□□□ 0.16
TMEM50B-201ENST00000420455 RAB3GAP1Q15042 981 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 CCDC129Q6ZRS4 1044 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.161e-7■■□□□ 11.8
TMEM50B-201ENST00000420455 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 SEMA3EO15041 775 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 CUL4AQ13619 759 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 FAM84BQ96KN1 310 aaPredicted RBP16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 CRAMP1Q96RY5 1269 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
TMEM50B-201ENST00000420455 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
TMEM50B-201ENST00000420455 HSPD1P10809 573 aaKnown RBP16.04■□□□□ 0.16
TMEM50B-201ENST00000420455 MCM4P33991 863 aa16.04■□□□□ 0.16
TMEM50B-201ENST00000420455 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
TMEM50B-201ENST00000420455 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
TMEM50B-201ENST00000420455 WTIPA6NIX2 430 aaPredicted RBP16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms