RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 KIF20AO95235 890 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
COL12A1-203ENST00000416123 IFFO1Q0D2I5 559 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 JDP2Q8WYK2 163 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 CCDC174Q6PII3 467 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 STXBP4Q6ZWJ1 553 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 G2E3Q7L622 706 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 CCNL1Q9UK58 526 aaPredicted RBP12.15□□□□□ -0.46
COL12A1-203ENST00000416123 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
COL12A1-203ENST00000416123 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 KLHDC4Q8TBB5 520 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 ZSCAN16Q9H4T2 348 aaPredicted RBP12.15□□□□□ -0.46
COL12A1-203ENST00000416123 ZNF408Q9H9D4 720 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 VAMP4O75379 141 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 ZNF165P49910 485 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 TIMM10P62072 90 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
COL12A1-203ENST00000416123 NBPF7P0C2Y1 421 aaPredicted RBP12.15□□□□□ -0.47
COL12A1-203ENST00000416123 ARID5AQ03989 594 aa12.15□□□□□ -0.47
COL12A1-203ENST00000416123 ARHGAP45Q92619 1136 aa12.15□□□□□ -0.47
COL12A1-203ENST00000416123 SPDYE3A6NKU9 549 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 DNM1Q05193 864 aaKnown RBP12.14□□□□□ -0.47
COL12A1-203ENST00000416123 ZSCAN23Q3MJ62 389 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 ANO6Q4KMQ2 910 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 RRP36Q96EU6 259 aaKnown RBP12.14□□□□□ -0.47
COL12A1-203ENST00000416123 SYNCQ9H7C4 482 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 DHX58Q96C10 678 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 EZRP15311 586 aaKnown RBP12.14□□□□□ -0.47
COL12A1-203ENST00000416123 KANK3Q6NY19 840 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 HLTFQ14527 1009 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL12A1-203ENST00000416123 FAM114A1Q8IWE2 563 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
COL12A1-203ENST00000416123 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 PHACTR2O75167 634 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 ITGA6P23229 1130 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 ZNF354CQ86Y25 554 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 RNF113AO15541 343 aaKnown RBP12.14□□□□□ -0.47
COL12A1-203ENST00000416123 PTGS1P23219 599 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 TAF5LO75529 589 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 ZBTB9Q96C00 473 aa12.14□□□□□ -0.47
COL12A1-203ENST00000416123 UFL1O94874 794 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 ERMNQ8TAM6 284 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 CALRP27797 417 aaKnown RBP12.13□□□□□ -0.47
COL12A1-203ENST00000416123 UBASH3AP57075 661 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 N4BP3O15049 544 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 A1BGP04217 495 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 KRT2P35908 639 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
COL12A1-203ENST00000416123 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
COL12A1-203ENST00000416123 LINS1Q8NG48 757 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 UIMC1Q96RL1 719 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 CCDC66A2RUB6 948 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
COL12A1-203ENST00000416123 PAFAH1B1P43034 410 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 UHRF1BP1Q6BDS2 1440 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 TMEM110-MUSTN1A8MSY1 372 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 TNNI2P48788 182 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 ZSCAN30Q86W11 494 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 NUP160Q12769 1436 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
COL12A1-203ENST00000416123 TMCO3Q6UWJ1 677 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 ASIC1P78348 528 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-203ENST00000416123 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 HOOK3Q86VS8 718 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 CPA1P15085 419 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 NF2P35240 595 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 AK2P54819 239 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 MBD4O95243 580 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 ALS2CR12Q96Q35 445 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 COMMD10Q9Y6G5 202 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 POLR3GO15318 223 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-203ENST00000416123 LMAN1P49257 510 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 PRKG1Q13976 671 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
COL12A1-203ENST00000416123 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 GOLGA6L10A0A0M3HER8 536 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 CCDC91Q7Z6B0 441 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 TCHPQ9BT92 498 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 COL17A1Q9UMD9 1497 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-203ENST00000416123 A0A1B0GUL7 405 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms