RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 ADGRB2O60241 1585 aa7.4□□□□□ -1.23
PBRM1-207ENST00000409767 HCLS1P14317 486 aaPredicted RBP7.4□□□□□ -1.23
PBRM1-207ENST00000409767 TNFAIP1Q13829 316 aa7.4□□□□□ -1.23
PBRM1-207ENST00000409767 CIAPIN1Q6FI81 312 aa7.4□□□□□ -1.23
PBRM1-207ENST00000409767 IFIT3O14879 490 aaKnown RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 NAA16Q6N069 864 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 MFSD6Q6ZSS7 791 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 PHACTR3Q96KR7 559 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 CARMIL3Q8ND23 1372 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 CD163L1Q9NR16 1453 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 VEGFAP15692 232 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 LMNB1P20700 586 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 CASTP20810 708 aaKnown RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 RPS8P62241 208 aaKnown RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 CAMKK2Q96RR4 588 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 BACH2Q9BYV9 841 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 DENND2AQ9ULE3 1009 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 MAP3K15Q6ZN16 1313 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 ERVV-1B6SEH8 477 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 TRIM21P19474 475 aaKnown RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 ECE1P42892 770 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 C9orf131Q5VYM1 1079 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 PRPF40BQ6NWY9 871 aaKnown RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 STK11IPQ8N1F8 1099 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 NCOA7Q8NI08 942 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 CDK12Q9NYV4 1490 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 TSPY2A6NKD2 308 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 DPEP1P16444 411 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 DLGAP5Q15398 846 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 CT47A1Q5JQC4 288 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 WDR78Q5VTH9 848 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 PPP4R3AQ6IN85 833 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 SYT17Q9BSW7 474 aa7.39□□□□□ -1.23
PBRM1-207ENST00000409767 RBM27Q9P2N5 1060 aaKnown RBP7.39□□□□□ -1.23
PBRM1-207ENST00000409767 CNTNAP4Q9C0A0 1308 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 SMARCA5O60264 1052 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 CYP7A1P22680 504 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 STK3Q13188 491 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 PNMA8AQ86V59 439 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 TXLNBQ8N3L3 684 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 KAT14Q9H8E8 782 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 TNS2Q63HR2 1409 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 F8W031 263 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 ODF2Q5BJF6 829 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 ARMC9Q7Z3E5 817 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 ESR2Q92731 530 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 COL15A1P39059 1388 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 COL5A2P05997 1499 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 HEG1Q9ULI3 1381 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 RDXP35241 583 aaKnown RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 ME1P48163 572 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 TMEM266Q2M3C6 531 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 MEIS3Q99687 375 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 PYM1Q9BRP8 204 aaKnown RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 HACL1Q9UJ83 578 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 KIF20AO95235 890 aa7.38□□□□□ -1.23
PBRM1-207ENST00000409767 BAG4O95429 457 aaKnown RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 SSRP1Q08945 709 aaKnown RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 LUC7LQ9NQ29 371 aaKnown RBP7.38□□□□□ -1.23
PBRM1-207ENST00000409767 AHDC1Q5TGY3 1603 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-207ENST00000409767 RGS12O14924 1447 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 ONECUT3O60422 494 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-207ENST00000409767 SMARCE1Q969G3 411 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 GOLGA8AA7E2F4 631 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 GOLGA8BA8MQT2 603 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 TTC6Q86TZ1 520 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 GOLGA6L1Q8N7Z2 621 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 CCDC39Q9UFE4 941 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 USP16Q9Y5T5 823 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 CSADQ9Y600 493 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 SMC2O95347 1197 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 LDHBP07195 334 aaKnown RBP7.37□□□□□ -1.23
PBRM1-207ENST00000409767 SYCP1Q15431 976 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 FAM89AQ96GI7 184 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 SH2D4AQ9H788 454 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 LIMCH1Q9UPQ0 1083 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 NWD1Q149M9 1564 aa7.37□□□□□ -1.23
PBRM1-207ENST00000409767 A0A0U1RQG5 324 aaPredicted RBP7.36□□□□□ -1.23
PBRM1-207ENST00000409767 CCDC194A0A1B0GVG4 234 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 MCM5P33992 734 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 NFIXQ14938 502 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 TTC22Q5TAA0 569 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 CEP57L1Q8IYX8 460 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 NCAPD2Q15021 1401 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 EYA2O00167 538 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 NUCB1Q02818 461 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 MCMDC2Q4G0Z9 681 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 SYNE4Q8N205 404 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 SMC1BQ8NDV3 1235 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 IL17REQ8NFR9 667 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 WDR66Q8TBY9 1149 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 C8orf76Q96K31 380 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 SNRKQ9NRH2 765 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 CALM1P0DP23 149 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 CALM2P0DP24 149 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 CALM3P0DP25 149 aa7.36□□□□□ -1.23
PBRM1-207ENST00000409767 DEKP35659 375 aaKnown RBP7.36□□□□□ -1.23
PBRM1-207ENST00000409767 TMEM67Q5HYA8 995 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms