RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RACK1P63244 317 aaKnown RBP7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 PTSQ03393 145 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 ZNF385CQ66K41 422 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 KANK3Q6NY19 840 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 SV2BQ7L1I2 683 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 RELL1Q8IUW5 271 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 GPRASP2Q96D09 838 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 RSRP1Q9BUV0 290 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 HIRIP3Q9BW71 556 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 TMEM238LA0A1B0GVL6 79 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 CYP2E1P05181 493 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 TNNI2P48788 182 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 NRLP54845 237 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 FAM182BQ5T319 152 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 PEAR1Q5VY43 1037 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 DIEXFQ68CQ4 756 aaKnown RBP7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 FOXR1Q6PIV2 292 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 C3orf58Q8NDZ4 430 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 GLIS3Q8NEA6 775 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 RBSNQ9H1K0 784 aa7.19□□□□□ -1.26
HMGB3P18-201ENST00000406327 GTF2F1P35269 517 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 DHX32Q7L7V1 743 aaKnown RBP7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 CCNJLQ8IV13 435 aa7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 BHMTQ93088 406 aa7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 TRERF1Q96PN7 1200 aa7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 OSMRQ99650 979 aa7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 COL25A1Q9BXS0 654 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 ABCB6Q9NP58 842 aa7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 LATS2Q9NRM7 1088 aa7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 AKAP2Q9Y2D5 859 aa7.18□□□□□ -1.26
HMGB3P18-201ENST00000406327 PAK2Q13177 524 aa7.17□□□□□ -1.26
HMGB3P18-201ENST00000406327 KIAA0825Q8IV33 1275 aa7.17□□□□□ -1.26
HMGB3P18-201ENST00000406327 SPON2Q9BUD6 331 aa7.17□□□□□ -1.26
HMGB3P18-201ENST00000406327 NDFIP2Q9NV92 336 aa7.17□□□□□ -1.26
HMGB3P18-201ENST00000406327 KBTBD4Q9NVX7 518 aa7.17□□□□□ -1.26
HMGB3P18-201ENST00000406327 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
HMGB3P18-201ENST00000406327 BNIP3LO60238 219 aa7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 UBAP2LQ14157 1087 aaKnown RBP7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 RPS26P11Q5JNZ5 115 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 RASGRP4Q8TDF6 673 aa7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 SEC16BQ96JE7 1060 aa7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 TMEM74Q96NL1 305 aa7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 TCF12Q99081 682 aa7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 ZKSCAN3Q9BRR0 538 aa7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 BHLHE41Q9C0J9 482 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P18-201ENST00000406327 STK10O94804 968 aaKnown RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 ARHGEF15O94989 841 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 THBS1P07996 1170 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 FGFR3P22607 806 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 ITPKAP23677 461 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 GBP2P32456 591 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 GPLD1P80108 840 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 COL9A2Q14055 689 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 DBN1Q16643 649 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 DPH6Q7L8W6 267 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 NOP9Q86U38 636 aaKnown RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 TMEM102Q8N9M5 508 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 NANOS1Q8WY41 292 aaKnown RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 SCARF2Q96GP6 870 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 ABHD17AQ96GS6 310 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 DNAJC2Q99543 621 aaKnown RBP7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 STRN4Q9NRL3 753 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 DZANK1Q9NVP4 752 aa7.15□□□□□ -1.26
HMGB3P18-201ENST00000406327 GHRHP01286 108 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 SLURP2P0DP57 97 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 CD33P20138 364 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 ITGA6P23229 1130 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 CEP120Q8N960 986 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 TRPM4Q8TD43 1214 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 DHX38Q92620 1227 aaKnown RBP7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 NSUN5Q96P11 429 aaKnown RBP7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 COPRSQ9NQ92 184 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 STRIP2Q9ULQ0 834 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 SAMM50Q9Y512 469 aa7.14□□□□□ -1.27
HMGB3P18-201ENST00000406327 FAM177BA6PVY3 158 aa7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 FGRP09769 529 aa7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 LMNB1P20700 586 aa7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 EIF4A3P38919 411 aaKnown RBP7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 RBL2Q08999 1139 aa7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 RNFT1Q5M7Z0 435 aa7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 FAM177A1Q8N128 213 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 WHAMMQ8TF30 809 aa7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 SLC30A3Q99726 388 aa7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
HMGB3P18-201ENST00000406327 LOC102724428A0A0B4J2F2 783 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 PDE2AO00408 941 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 ADAM23O75077 832 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 SMNDC1O75940 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 SSBP05455 408 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 LIG3P49916 1009 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 SIK1P57059 783 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 RPS26P62854 115 aaKnown RBP7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 NBPF6Q5VWK0 638 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 TPTE2Q6XPS3 522 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms