RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 TMEM87AQ8NBN3 555 aa17.6■□□□□ 0.41
ATG4B-206ENST00000405546 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
ATG4B-206ENST00000405546 KDM6AO15550 1401 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-206ENST00000405546 A0A1B0GUL7 405 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 APPP05067 770 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 RFX5P48382 616 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-206ENST00000405546 TTC39AQ5SRH9 613 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 CEP135Q66GS9 1140 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 KBTBD3Q8NAB2 608 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 KIF18AQ8NI77 898 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 FAM200AQ8TCP9 573 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 IL17RAQ96F46 866 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 FEZ1Q99689 392 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 DDX41Q9UJV9 622 aaKnown RBP17.59■□□□□ 0.41
ATG4B-206ENST00000405546 LRRC37A3O60309 1634 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 HAUS7Q99871 368 aa17.59■□□□□ 0.41
ATG4B-206ENST00000405546 FTOQ9C0B1 505 aaKnown RBP eCLIP17.58■□□□□ 0.41
ATG4B-206ENST00000405546 SMTNL1A8MU46 457 aa17.58■□□□□ 0.4
ATG4B-206ENST00000405546 POLR3GO15318 223 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-206ENST00000405546 TERF2Q15554 542 aa17.58■□□□□ 0.4
ATG4B-206ENST00000405546 CCDC158Q5M9N0 1113 aa17.58■□□□□ 0.4
ATG4B-206ENST00000405546 LEO1Q8WVC0 666 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-206ENST00000405546 FBXO38Q6PIJ6 1188 aa17.57■□□□□ 0.4
ATG4B-206ENST00000405546 MEGF6O75095 1541 aa17.57■□□□□ 0.4
ATG4B-206ENST00000405546 NR1I2O75469 434 aa17.57■□□□□ 0.4
ATG4B-206ENST00000405546 SF3A1Q15459 793 aaKnown RBP17.57■□□□□ 0.4
ATG4B-206ENST00000405546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.57■□□□□ 0.4
ATG4B-206ENST00000405546 IL15P40933 162 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-206ENST00000405546 ME1P48163 572 aa17.56■□□□□ 0.4
ATG4B-206ENST00000405546 SCRN1Q12765 414 aa17.56■□□□□ 0.4
ATG4B-206ENST00000405546 EYA2O00167 538 aa17.56■□□□□ 0.4
ATG4B-206ENST00000405546 ZNF165P49910 485 aa17.56■□□□□ 0.4
ATG4B-206ENST00000405546 OTUD7BQ6GQQ9 843 aa17.56■□□□□ 0.4
ATG4B-206ENST00000405546 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
ATG4B-206ENST00000405546 KRT222Q8N1A0 295 aa17.56■□□□□ 0.4
ATG4B-206ENST00000405546 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
ATG4B-206ENST00000405546 SYNE4Q8N205 404 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 LRRN4CLQ8ND94 238 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 KCNB2Q92953 911 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-206ENST00000405546 STOX1Q6ZVD7 989 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 STK11IPQ8N1F8 1099 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 TRIM34Q9BYJ4 488 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 ZNF75DP51815 510 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 FOXO4P98177 505 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 TMOD3Q9NYL9 352 aa17.55■□□□□ 0.4
ATG4B-206ENST00000405546 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
ATG4B-206ENST00000405546 CPLX1O14810 134 aa17.54■□□□□ 0.4
ATG4B-206ENST00000405546 ADORA1P30542 326 aa17.54■□□□□ 0.4
ATG4B-206ENST00000405546 ZRSR1Q15695 479 aaKnown RBP17.54■□□□□ 0.4
ATG4B-206ENST00000405546 ZNF609O15014 1411 aa17.54■□□□□ 0.4
ATG4B-206ENST00000405546 POLR3DP05423 398 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-206ENST00000405546 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
ATG4B-206ENST00000405546 MED23Q9ULK4 1368 aa17.54■□□□□ 0.4
ATG4B-206ENST00000405546 GOLGA6L19H0YKK7 550 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 HSPD1P10809 573 aaKnown RBP17.53■□□□□ 0.4
ATG4B-206ENST00000405546 RABL6Q3YEC7 729 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-206ENST00000405546 ATG9AQ7Z3C6 839 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 TMX1Q9H3N1 280 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 BECN2A8MW95 431 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 H7C1W4 665 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 ERCC6LQ2NKX8 1250 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 COL15A1P39059 1388 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 E7EWF7 191 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 METTL24Q5JXM2 366 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
ATG4B-206ENST00000405546 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
ATG4B-206ENST00000405546 IL2RBP14784 551 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.4
ATG4B-206ENST00000405546 CCDC73Q6ZRK6 1079 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 RALYLQ86SE5 291 aaKnown RBP17.52■□□□□ 0.4
ATG4B-206ENST00000405546 TIGD1Q96MW7 591 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 IDH1O75874 414 aaKnown RBP17.52■□□□□ 0.4
ATG4B-206ENST00000405546 SKILP12757 684 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 LDHAL6AQ6ZMR3 332 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 LRP10Q7Z4F1 713 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 SDF4Q9BRK5 362 aa17.52■□□□□ 0.4
ATG4B-206ENST00000405546 RBM6P78332 1123 aaKnown RBP17.52■□□□□ 0.39
ATG4B-206ENST00000405546 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.39
ATG4B-206ENST00000405546 NEK11Q8NG66 645 aa17.52■□□□□ 0.39
ATG4B-206ENST00000405546 GABPB1Q06547 395 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-206ENST00000405546 PTPN21Q16825 1174 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-206ENST00000405546 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 PGBD1Q96JS3 809 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 ASAP1Q9ULH1 1129 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 TPM3P06753 285 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 HMGB1P09429 215 aaKnown RBP17.51■□□□□ 0.39
ATG4B-206ENST00000405546 HELBQ8NG08 1087 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-206ENST00000405546 MARF1Q9Y4F3 1742 aaKnown RBP17.51■□□□□ 0.39
ATG4B-206ENST00000405546 PCDH11XQ9BZA7 1347 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 PCDH11YQ9BZA8 1340 aa17.51■□□□□ 0.39
ATG4B-206ENST00000405546 GNL2Q13823 731 aaKnown RBP17.5■□□□□ 0.39
ATG4B-206ENST00000405546 OSBP2Q969R2 916 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms