RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 TDRD7Q8NHU6 1098 aaKnown RBP22.93■■□□□ 1.26
COL13A1-205ENST00000398978 POLR3DP05423 398 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-205ENST00000398978 CHAF1AQ13111 956 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-205ENST00000398978 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-205ENST00000398978 OSBP2Q969R2 916 aa22.93■■□□□ 1.26
COL13A1-205ENST00000398978 CWC25Q9NXE8 425 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-205ENST00000398978 WASHC4Q2M389 1173 aa22.93■■□□□ 1.26
COL13A1-205ENST00000398978 ZNF592Q92610 1267 aa22.93■■□□□ 1.26
COL13A1-205ENST00000398978 ZSCAN16Q9H4T2 348 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-205ENST00000398978 C19orf44Q9H6X5 657 aa22.93■■□□□ 1.26
COL13A1-205ENST00000398978 SPDYE4A6NLX3 237 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 H7C1W4 665 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 PDIA3P30101 505 aaKnown RBP22.92■■□□□ 1.26
COL13A1-205ENST00000398978 PPP4R3BQ5MIZ7 849 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 FSIP1Q8NA03 581 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 SH3TC1Q8TE82 1336 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 GOLGA6L19H0YKK7 550 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 EXOSC10Q01780 885 aaKnown RBP22.92■■□□□ 1.26
COL13A1-205ENST00000398978 ZMYM1Q5SVZ6 1142 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 FILIP1Q7Z7B0 1213 aa22.92■■□□□ 1.26
COL13A1-205ENST00000398978 ATF3P18847 181 aa22.91■■□□□ 1.26
COL13A1-205ENST00000398978 A0A1B0GVL5 298 aa22.91■■□□□ 1.26
COL13A1-205ENST00000398978 TPM3P06753 285 aa22.91■■□□□ 1.26
COL13A1-205ENST00000398978 PDIA4P13667 645 aaKnown RBP22.91■■□□□ 1.26
COL13A1-205ENST00000398978 SNW1Q13573 536 aaKnown RBP22.91■■□□□ 1.26
COL13A1-205ENST00000398978 TRPM3Q9HCF6 1732 aaPredicted RBP22.91■■□□□ 1.26
COL13A1-205ENST00000398978 GTF2F1P35269 517 aaKnown RBP eCLIP22.9■■□□□ 1.26
COL13A1-205ENST00000398978 IQCB1Q15051 598 aa22.9■■□□□ 1.26
COL13A1-205ENST00000398978 SCARF1Q14162 830 aa22.9■■□□□ 1.26
COL13A1-205ENST00000398978 LAMA4Q16363 1823 aa22.9■■□□□ 1.26
COL13A1-205ENST00000398978 ATP2B3Q16720 1220 aa22.9■■□□□ 1.26
COL13A1-205ENST00000398978 GORABQ5T7V8 394 aa22.9■■□□□ 1.26
COL13A1-205ENST00000398978 CCDC73Q6ZRK6 1079 aa22.9■■□□□ 1.26
COL13A1-205ENST00000398978 DENND2AQ9ULE3 1009 aa22.9■■□□□ 1.26
COL13A1-205ENST00000398978 USP27XA6NNY8 438 aa22.89■■□□□ 1.26
COL13A1-205ENST00000398978 EYA2O00167 538 aa22.89■■□□□ 1.26
COL13A1-205ENST00000398978 RNF113AO15541 343 aaKnown RBP22.89■■□□□ 1.26
COL13A1-205ENST00000398978 FDPSP14324 419 aaKnown RBP22.89■■□□□ 1.26
COL13A1-205ENST00000398978 SYNE4Q8N205 404 aa22.89■■□□□ 1.26
COL13A1-205ENST00000398978 CCDC94Q9BW85 323 aaPredicted RBP22.89■■□□□ 1.26
COL13A1-205ENST00000398978 RCOR1Q9UKL0 485 aa22.89■■□□□ 1.26
COL13A1-205ENST00000398978 BECN2A8MW95 431 aa22.89■■□□□ 1.25
COL13A1-205ENST00000398978 HELLSQ9NRZ9 838 aa22.89■■□□□ 1.25
COL13A1-205ENST00000398978 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.25
COL13A1-205ENST00000398978 TNNT1P13805 278 aa22.88■■□□□ 1.25
COL13A1-205ENST00000398978 ADAMTS7Q9UKP4 1686 aa22.88■■□□□ 1.25
COL13A1-205ENST00000398978 CAMTA1Q9Y6Y1 1673 aa22.88■■□□□ 1.25
COL13A1-205ENST00000398978 KINO60870 393 aaKnown RBP22.88■■□□□ 1.25
COL13A1-205ENST00000398978 TPD52L1Q16890 204 aaPredicted RBP22.88■■□□□ 1.25
COL13A1-205ENST00000398978 DSCC1Q9BVC3 393 aa22.88■■□□□ 1.25
COL13A1-205ENST00000398978 IL15P40933 162 aaPredicted RBP22.88■■□□□ 1.25
COL13A1-205ENST00000398978 MTERF4Q7Z6M4 381 aaKnown RBP22.88■■□□□ 1.25
COL13A1-205ENST00000398978 TRMT1Q9NXH9 659 aaKnown RBP22.87■■□□□ 1.25
COL13A1-205ENST00000398978 CLIC4Q9Y696 253 aa22.87■■□□□ 1.25
COL13A1-205ENST00000398978 BIN1O00499 593 aa22.87■■□□□ 1.25
COL13A1-205ENST00000398978 HMGB1P09429 215 aaKnown RBP22.87■■□□□ 1.25
COL13A1-205ENST00000398978 ISM2Q6H9L7 571 aa22.87■■□□□ 1.25
COL13A1-205ENST00000398978 AOPEPQ8N6M6 819 aa22.87■■□□□ 1.25
COL13A1-205ENST00000398978 PCDHA7Q9UN72 937 aa22.87■■□□□ 1.25
COL13A1-205ENST00000398978 NAA16Q6N069 864 aaPredicted RBP22.86■■□□□ 1.25
COL13A1-205ENST00000398978 FAM89AQ96GI7 184 aa22.86■■□□□ 1.25
COL13A1-205ENST00000398978 LLPHQ9BRT6 129 aaKnown RBP22.86■■□□□ 1.25
COL13A1-205ENST00000398978 CARMIL3Q8ND23 1372 aa22.86■■□□□ 1.25
COL13A1-205ENST00000398978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL13A1-205ENST00000398978 PALLDQ8WX93 1383 aa22.86■■□□□ 1.25
COL13A1-205ENST00000398978 RXRAP19793 462 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 U2AF2P26368 475 aaKnown RBP eCLIP22.85■■□□□ 1.25
COL13A1-205ENST00000398978 NKX2-3Q8TAU0 364 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 FOXP2O15409 715 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 STX1AQ16623 288 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 TOM1L2Q6ZVM7 507 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 SDF4Q9BRK5 362 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 PODXL2Q9NZ53 605 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 CEP126Q9P2H0 1117 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 TTC39AQ5SRH9 613 aa22.85■■□□□ 1.25
COL13A1-205ENST00000398978 DHX40Q8IX18 779 aaKnown RBP22.85■■□□□ 1.25
COL13A1-205ENST00000398978 PUS7LQ9H0K6 701 aaKnown RBP22.85■■□□□ 1.25
COL13A1-205ENST00000398978 PDCL2Q8N4E4 241 aa22.84■■□□□ 1.25
COL13A1-205ENST00000398978 SYTL4Q96C24 671 aaPredicted RBP22.84■■□□□ 1.25
COL13A1-205ENST00000398978 ZAP70P43403 619 aa22.84■■□□□ 1.25
COL13A1-205ENST00000398978 NDUFA8P51970 172 aa22.84■■□□□ 1.25
COL13A1-205ENST00000398978 ENGASEQ8NFI3 743 aa22.84■■□□□ 1.25
COL13A1-205ENST00000398978 XAGE2Q96GT9 111 aa22.84■■□□□ 1.25
COL13A1-205ENST00000398978 KLF18A0A0U1RQI7 1052 aa22.83■■□□□ 1.25
COL13A1-205ENST00000398978 FGAP02671 866 aa22.83■■□□□ 1.25
COL13A1-205ENST00000398978 SF3A1Q15459 793 aaKnown RBP22.83■■□□□ 1.25
COL13A1-205ENST00000398978 AIFM3Q96NN9 605 aa22.83■■□□□ 1.25
COL13A1-205ENST00000398978 SALL1Q9NSC2 1324 aa22.83■■□□□ 1.25
COL13A1-205ENST00000398978 ZNF396Q96N95 335 aaPredicted RBP22.83■■□□□ 1.25
COL13A1-205ENST00000398978 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.83■■□□□ 1.25
COL13A1-205ENST00000398978 V9GYY5 206 aaPredicted RBP22.83■■□□□ 1.25
COL13A1-205ENST00000398978 FAM160A1Q05DH4 1040 aa22.83■■□□□ 1.24
COL13A1-205ENST00000398978 RFX7Q2KHR2 1363 aa22.82■■□□□ 1.24
COL13A1-205ENST00000398978 GOLGA8BA8MQT2 603 aa22.82■■□□□ 1.24
COL13A1-205ENST00000398978 CCDC57Q2TAC2 916 aa22.82■■□□□ 1.24
COL13A1-205ENST00000398978 LRRC8AQ8IWT6 810 aa22.82■■□□□ 1.24
COL13A1-205ENST00000398978 PRC1O43663 620 aa22.82■■□□□ 1.24
COL13A1-205ENST00000398978 AGXT2Q9BYV1 514 aa22.82■■□□□ 1.24
COL13A1-205ENST00000398978 TMEM94Q12767 1356 aa22.82■■□□□ 1.24
COL13A1-205ENST00000398978 STK38Q15208 465 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms