RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 BRAPQ7Z569 592 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 DZIP3Q86Y13 1208 aaKnown RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 MARCH10Q8NA82 808 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 OTUD7AQ8TE49 926 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 NGLY1Q96IV0 654 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 LEMD3Q9Y2U8 911 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 RBM8AQ9Y5S9 174 aaKnown RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 ORC2Q13416 577 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 SMYD5Q6GMV2 418 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 TNPO1Q92973 898 aaKnown RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 LDHCP07864 332 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 CREB3L3Q68CJ9 461 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 IL1RAPL2Q9NP60 686 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 PLSCR1O15162 318 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 SART3Q15020 963 aaKnown RBP6.93□□□□□ -1.3
PTPRD-206ENST00000397617 TAF7LQ5H9L4 462 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 PYM1Q9BRP8 204 aaKnown RBP6.93□□□□□ -1.3
PTPRD-206ENST00000397617 LAMA4Q16363 1823 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 PFKFB2O60825 505 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 SLF2Q8IX21 1173 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 RILPL2Q969X0 211 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 SMC3Q9UQE7 1217 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 IMMTQ16891 758 aaKnown RBP6.93□□□□□ -1.3
PTPRD-206ENST00000397617 SMARCC2Q8TAQ2 1214 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 DDX19AQ9NUU7 478 aaKnown RBP6.93□□□□□ -1.3
PTPRD-206ENST00000397617 BBOX1O75936 387 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 EPHA10Q5JZY3 1008 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 MPHOSPH8Q99549 860 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 ANAPC4Q9UJX5 808 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 ZBTB1Q9Y2K1 713 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 TERF1P54274 439 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 CRY2Q49AN0 593 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 GORABQ5T7V8 394 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 GTF3C6Q969F1 213 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 A0A1W2PQ27 194 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 IRS4O14654 1257 aaPredicted RBP6.93□□□□□ -1.3
PTPRD-206ENST00000397617 SMARCA1P28370 1054 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 NEK1Q96PY6 1258 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 SNX14Q9Y5W7 946 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 TAF1LQ8IZX4 1826 aa6.93□□□□□ -1.3
PTPRD-206ENST00000397617 RPS6KB1P23443 525 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 NLRP3Q96P20 1036 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 STRN4Q9NRL3 753 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 USP25Q9UHP3 1055 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 TRMT112Q9UI30 125 aaKnown RBP6.92□□□□□ -1.3
PTPRD-206ENST00000397617 RALYLQ86SE5 291 aaKnown RBP6.92□□□□□ -1.3
PTPRD-206ENST00000397617 BRIP1Q9BX63 1249 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 KRT23Q9C075 422 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 SENP3Q9H4L4 574 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-206ENST00000397617 YEATS4O95619 227 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 FGRP09769 529 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
PTPRD-206ENST00000397617 DENND2AQ9ULE3 1009 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 STX6O43752 255 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
PTPRD-206ENST00000397617 CALM1P0DP23 149 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 CALM2P0DP24 149 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 CALM3P0DP25 149 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 EXOSC10Q01780 885 aaKnown RBP6.92□□□□□ -1.3
PTPRD-206ENST00000397617 DBNDD2Q9BQY9 259 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 NTSR2O95665 410 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 A1BGP04217 495 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 TTLL7Q6ZT98 887 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-206ENST00000397617 PDRG1Q9NUG6 133 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 ASAP1Q9ULH1 1129 aa6.92□□□□□ -1.3
PTPRD-206ENST00000397617 SBF2Q86WG5 1849 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 CDK11BP21127 795 aaKnown RBP6.91□□□□□ -1.3
PTPRD-206ENST00000397617 ATP8A2Q9NTI2 1148 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 CCDC88AQ3V6T2 1871 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 AIMP1Q12904 312 aaKnown RBP6.91□□□□□ -1.3
PTPRD-206ENST00000397617 WDR66Q8TBY9 1149 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 GOLGA6L3A6NEY3 463 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 FRAT2O75474 233 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-206ENST00000397617 MYL6BP14649 208 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 HDLBPQ00341 1268 aaKnown RBP6.91□□□□□ -1.3
PTPRD-206ENST00000397617 TRAF1Q13077 416 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 RBM33Q96EV2 1170 aaKnown RBP6.91□□□□□ -1.3
PTPRD-206ENST00000397617 UBAP1LF5GYI3 381 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 TUBB4AP04350 444 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 KCTD17Q8N5Z5 321 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 MAF1Q9H063 256 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 GNAQP50148 359 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 NCOA7Q8NI08 942 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
PTPRD-206ENST00000397617 PPP4CP60510 307 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 METTL24Q5JXM2 366 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 PDLIM2Q96JY6 352 aa6.91□□□□□ -1.3
PTPRD-206ENST00000397617 CRKLP46109 303 aaKnown RBP6.9□□□□□ -1.3
PTPRD-206ENST00000397617 NLGN1Q8N2Q7 840 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 VPS33BQ9H267 617 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 PODXL2Q9NZ53 605 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 ANGEL1Q9UNK9 670 aaKnown RBP6.9□□□□□ -1.3
PTPRD-206ENST00000397617 FAM237AA0A1B0GTK4 181 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 hCG_1984214I3L0E3 225 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 SBK1Q52WX2 424 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 C16orf71Q8IYS4 520 aaPredicted RBP6.9□□□□□ -1.3
PTPRD-206ENST00000397617 ZNF713Q8N859 430 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms