RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 EPHA10Q5JZY3 1008 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 KIDINS220Q9ULH0 1771 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 GTF2F1P35269 517 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 METAP2P50579 478 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 NEO1Q92859 1461 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 RAD21O60216 631 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 GNG11P61952 73 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 ARAP3Q8WWN8 1544 aa17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 CRB1P82279 1406 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 A0A1B0GUL7 405 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 GSDMDP57764 484 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 MPHOSPH8Q99549 860 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 KIAA1210Q9ULL0 1709 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 CAVIN2O95810 425 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 KIF2AO00139 706 aaPredicted RBP17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 SLC4A8Q2Y0W8 1093 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 NAPBQ9H115 298 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 BRMS1Q9HCU9 246 aa17.12■□□□□ 0.33
UBQLN1-202ENST00000376395 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 SLU7O95391 586 aaKnown RBP17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 A2ML1A8K2U0 1454 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 UBAC1Q9BSL1 405 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 HOXB7P09629 217 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 NAP1L1P55209 391 aaKnown RBP17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 ATP2B3Q16720 1220 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 KRT222Q8N1A0 295 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 PHKBQ93100 1093 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 ZKSCAN3Q9BRR0 538 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
UBQLN1-202ENST00000376395 CAGE1Q8TC20 777 aa17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 LRP2BPQ9P2M1 347 aa17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 SLC12A7Q9Y666 1083 aa17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 RNF113AO15541 343 aaKnown RBP17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 PGBD1Q96JS3 809 aa17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 KCNF1Q9H3M0 494 aa17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 AKAP2Q9Y2D5 859 aa17.1■□□□□ 0.33
UBQLN1-202ENST00000376395 E7EWF7 191 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 AFMP43652 599 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 XPO4Q9C0E2 1151 aaKnown RBP17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 STX17P56962 302 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 TOB2Q14106 344 aaPredicted RBP17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 KCNG4Q8TDN1 519 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 KARSQ15046 597 aaKnown RBP17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 ZC3H13Q5T200 1668 aaKnown RBP17.09■□□□□ 0.33
UBQLN1-202ENST00000376395 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.33
UBQLN1-202ENST00000376395 CLSTN1O94985 981 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 ATP5JP18859 108 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 AP5Z1O43299 807 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 CCDC70Q6NSX1 233 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 LRRC8AQ8IWT6 810 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
UBQLN1-202ENST00000376395 ERCC6LQ2NKX8 1250 aa17.07■□□□□ 0.32
UBQLN1-202ENST00000376395 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
UBQLN1-202ENST00000376395 DACH1Q9UI36 760 aa17.07■□□□□ 0.32
UBQLN1-202ENST00000376395 MAP2P11137 1827 aaKnown RBP17.07■□□□□ 0.32
UBQLN1-202ENST00000376395 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
UBQLN1-202ENST00000376395 ZSCAN12O43309 604 aa17.07■□□□□ 0.32
UBQLN1-202ENST00000376395 ZNF202O95125 648 aa17.07■□□□□ 0.32
UBQLN1-202ENST00000376395 B4E1Z4 1266 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 NDUFA8P51970 172 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 COL9A3Q14050 684 aaPredicted RBP17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 RAI14Q9P0K7 980 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 PCDHA7Q9UN72 937 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 KDRP35968 1356 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 CASQ1P31415 396 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
UBQLN1-202ENST00000376395 ZBTB43O43298 467 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms