RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 VPS36Q86VN1 386 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 ZC3H12CQ9C0D7 883 aaKnown RBP15.64■□□□□ 0.09
C9orf47-203ENST00000375851 CENPHQ9H3R5 247 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 MCM9Q9NXL9 1143 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 ITGA6P23229 1130 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 EHMT1Q9H9B1 1298 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 ARHGEF10O15013 1369 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 SGSM2O43147 1006 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 TMCO3Q6UWJ1 677 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 TRMT1LQ7Z2T5 733 aaKnown RBP15.63■□□□□ 0.09
C9orf47-203ENST00000375851 ABCA8O94911 1581 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 TRIM75PA6NK02 468 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 N4BP3O15049 544 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 FAM193AP78312 1265 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 CCDC129Q6ZRS4 1044 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 ZNF594Q96JF6 807 aaPredicted RBP15.63■□□□□ 0.09
C9orf47-203ENST00000375851 CASQ1P31415 396 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 DNAJC25Q9H1X3 360 aa15.63■□□□□ 0.09
C9orf47-203ENST00000375851 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 PICALMQ13492 652 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 CCDC40Q4G0X9 1142 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 WDR78Q5VTH9 848 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 AOX1Q06278 1338 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 TCERG1LQ5VWI1 586 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 CCDC102AQ96A19 550 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 USO1O60763 962 aaKnown RBP15.62■□□□□ 0.09
C9orf47-203ENST00000375851 RXRAP19793 462 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 FAM227BQ96M60 508 aa15.62■□□□□ 0.09
C9orf47-203ENST00000375851 MBD4O95243 580 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 UBASH3AP57075 661 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 PARP10Q53GL7 1025 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 PLXNC1O60486 1568 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 CALM1P0DP23 149 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 CALM2P0DP24 149 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 CALM3P0DP25 149 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 SSR1P43307 286 aaKnown RBP15.61■□□□□ 0.09
C9orf47-203ENST00000375851 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 CDCA7Q9BWT1 371 aaPredicted RBP15.61■□□□□ 0.09
C9orf47-203ENST00000375851 ANKRD2Q9GZV1 360 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 TSPYL1Q9H0U9 437 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 KDM6BO15054 1643 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 NEFHP12036 1026 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 HSP90AA4PQ58FG1 418 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 USP44Q9H0E7 712 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 GBP3Q9H0R5 595 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 ABCC4O15439 1325 aa15.61■□□□□ 0.09
C9orf47-203ENST00000375851 GNPATO15228 680 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 JAG2Q9Y219 1238 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 KCNQ3O43525 872 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 CCDC186Q7Z3E2 898 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 PAF1Q8N7H5 531 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 XAGE2Q96GT9 111 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 ZNF830Q96NB3 372 aaPredicted RBP15.6■□□□□ 0.09
C9orf47-203ENST00000375851 SLC27A2O14975 620 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 GIGYF1O75420 1035 aaPredicted RBP15.6■□□□□ 0.09
C9orf47-203ENST00000375851 JAKMIP3Q5VZ66 844 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 RRAGBQ5VZM2 374 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 RMND1Q9NWS8 449 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 SLAIN2Q9P270 581 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 SNX14Q9Y5W7 946 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 ZFYVE16Q7Z3T8 1539 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 PDE8AO60658 829 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 POTEJP0CG39 1038 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 RPS6KB1P23443 525 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 STAT6P42226 847 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 NAPAP54920 295 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 TYRO3Q06418 890 aa15.6■□□□□ 0.09
C9orf47-203ENST00000375851 LDHBP07195 334 aaKnown RBP15.59■□□□□ 0.09
C9orf47-203ENST00000375851 FAM114A1Q8IWE2 563 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 METP08581 1390 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 MYO1BO43795 1136 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 DNA2P51530 1060 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 AOPEPQ8N6M6 819 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 KBTBD3Q8NAB2 608 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 CCDC150Q8NCX0 1101 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 LRRC27Q9C0I9 530 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 TFCP2L1Q9NZI6 479 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 PLCG2P16885 1265 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 CALML3P27482 149 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 SNW1Q13573 536 aaKnown RBP15.59■□□□□ 0.09
C9orf47-203ENST00000375851 PPP4R3AQ6IN85 833 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 OGFOD1Q8N543 542 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 CRACR2AQ9BSW2 395 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 TMX1Q9H3N1 280 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 RRP9O43818 475 aaKnown RBP15.59■□□□□ 0.09
C9orf47-203ENST00000375851 APPBP2Q92624 585 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 EXOC1Q9NV70 894 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
C9orf47-203ENST00000375851 MYO5CQ9NQX4 1742 aa15.58■□□□□ 0.09
C9orf47-203ENST00000375851 RTL9Q8NET4 1388 aa15.58■□□□□ 0.09
C9orf47-203ENST00000375851 TTLL12Q14166 644 aaPredicted RBP15.58■□□□□ 0.09
C9orf47-203ENST00000375851 PUM3Q15397 648 aaKnown RBP15.58■□□□□ 0.09
C9orf47-203ENST00000375851 BRAPQ7Z569 592 aa15.58■□□□□ 0.09
C9orf47-203ENST00000375851 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 PAFAH1B1P43034 410 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 ZKSCAN3Q9BRR0 538 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms