RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 PAFAH1B1P43034 410 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 PANK1Q8TE04 598 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 PPRC1Q5VV67 1664 aaKnown RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 ATP2B1P20020 1258 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 MASTLQ96GX5 879 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 TRMT1LQ7Z2T5 733 aaKnown RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 FAM200AQ8TCP9 573 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 PIBF1Q8WXW3 757 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 V9GYY5 206 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 PLCG2P16885 1265 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 NCBP1Q09161 790 aaKnown RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 RAB3GAP1Q15042 981 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 LRSAM1Q6UWE0 723 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 TSG101Q99816 390 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 BACH2Q9BYV9 841 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 LDHBP07195 334 aaKnown RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 SAMD9LQ8IVG5 1584 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 HECW2Q9P2P5 1572 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 FLT4P35916 1363 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 M0QZ92 97 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 HCLS1P14317 486 aaPredicted RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 NPR1P16066 1061 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 CASQ1P31415 396 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 IFFO1Q0D2I5 559 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 PYM1Q9BRP8 204 aaKnown RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 PDRG1Q9NUG6 133 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 ZEB2O60315 1214 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 PPP4R3BQ5MIZ7 849 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 BBXQ8WY36 941 aaPredicted RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 THUMPD2Q9BTF0 503 aaKnown RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 WDR17Q8IZU2 1322 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 TCP10L2B9ZVM9 353 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 LMNB1P20700 586 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 CRKLP46109 303 aaKnown RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 ZYXQ15942 572 aaKnown RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 UBE3BQ7Z3V4 1068 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 HOOK3Q86VS8 718 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 XAGE3Q8WTP9 111 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 JARID2Q92833 1246 aaPredicted RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 ALS2CR12Q96Q35 445 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 CFAP100Q494V2 611 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 CCDC183Q5T5S1 534 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 DHX37Q8IY37 1157 aaKnown RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 CRNKL1Q9BZJ0 848 aaKnown RBP7.22□□□□□ -1.25
PTPN3-202ENST00000374541 ZMYND15Q9H091 742 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 SH3TC1Q8TE82 1336 aa7.22□□□□□ -1.25
PTPN3-202ENST00000374541 ERICH4A6NGS2 130 aa7.21□□□□□ -1.25
PTPN3-202ENST00000374541 IVLP07476 585 aa7.21□□□□□ -1.25
PTPN3-202ENST00000374541 MVPQ14764 893 aaKnown RBP7.21□□□□□ -1.25
PTPN3-202ENST00000374541 COPS6Q7L5N1 327 aa7.21□□□□□ -1.25
PTPN3-202ENST00000374541 WDR63Q8IWG1 891 aa7.21□□□□□ -1.25
PTPN3-202ENST00000374541 PREX2Q70Z35 1606 aa7.21□□□□□ -1.25
PTPN3-202ENST00000374541 ERVV-2B6SEH9 535 aa7.21□□□□□ -1.25
PTPN3-202ENST00000374541 TBC1D10BQ4KMP7 808 aaPredicted RBP7.21□□□□□ -1.25
PTPN3-202ENST00000374541 PRIMPOLQ96LW4 560 aa7.21□□□□□ -1.25
PTPN3-202ENST00000374541 SH2B1Q9NRF2 756 aaPredicted RBP7.21□□□□□ -1.25
PTPN3-202ENST00000374541 PIK3R4Q99570 1358 aa7.21□□□□□ -1.26
PTPN3-202ENST00000374541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.21□□□□□ -1.26
PTPN3-202ENST00000374541 RPAP2Q8IXW5 612 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-202ENST00000374541 YEATS4O95619 227 aa7.21□□□□□ -1.26
PTPN3-202ENST00000374541 APLP1P51693 650 aa7.21□□□□□ -1.26
PTPN3-202ENST00000374541 TUBB4BP68371 445 aa7.21□□□□□ -1.26
PTPN3-202ENST00000374541 TCP10Q12799 353 aa7.21□□□□□ -1.26
PTPN3-202ENST00000374541 SEPT11Q9NVA2 429 aaKnown RBP7.21□□□□□ -1.26
PTPN3-202ENST00000374541 MAP3K2Q9Y2U5 619 aa7.21□□□□□ -1.26
PTPN3-202ENST00000374541 ANAPC15P60006 121 aa7.21□□□□□ -1.26
PTPN3-202ENST00000374541 KIAA0825Q8IV33 1275 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 ZNF277Q9NRM2 450 aaPredicted RBP7.2□□□□□ -1.26
PTPN3-202ENST00000374541 SAMM50Q9Y512 469 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 MROH1Q8NDA8 1641 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 PALLDQ8WX93 1383 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 LIG1P18858 919 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 FBLN1P23142 703 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 KIF4BQ2VIQ3 1234 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 NSRP1Q9H0G5 558 aaKnown RBP7.2□□□□□ -1.26
PTPN3-202ENST00000374541 ARAP3Q8WWN8 1544 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 RANBP6O60518 1105 aaKnown RBP7.2□□□□□ -1.26
PTPN3-202ENST00000374541 GTF2IP78347 998 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 UVSSAQ2YD98 709 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 RAB34Q9BZG1 259 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 ZHX3Q9H4I2 956 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 SSFA2P28290 1259 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 FTOQ9C0B1 505 aaKnown RBP eCLIP7.2□□□□□ -1.26
PTPN3-202ENST00000374541 DDX19AQ9NUU7 478 aaKnown RBP7.2□□□□□ -1.26
PTPN3-202ENST00000374541 PIK3C2GO75747 1445 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 MYO5CQ9NQX4 1742 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 CCDC196A0A1B0GTZ2 297 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 DYNC1I1O14576 645 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 TOP1P11387 765 aaKnown RBP7.2□□□□□ -1.26
PTPN3-202ENST00000374541 SYNE4Q8N205 404 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 CEP112Q8N8E3 955 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 MICAL1Q8TDZ2 1067 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 PNMA3Q9UL41 463 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 OVOS2A0A0G2JMS6 1433 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 OVOS2A0A0J9YW53 1432 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 OVOS2Q6IE36 1432 aa7.2□□□□□ -1.26
PTPN3-202ENST00000374541 GSTTP1A0A1W2PQM5 241 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms