RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 TMEM87AQ8NBN3 555 aa4.6□□□□□ -1.67
COL6A5-203ENST00000373157 NACC1Q96RE7 527 aa4.6□□□□□ -1.67
COL6A5-203ENST00000373157 SCAMP3O14828 347 aaKnown RBP4.59□□□□□ -1.67
COL6A5-203ENST00000373157 BMP4P12644 408 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 GNA15P30679 374 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 TRIP4Q15650 581 aaPredicted RBP4.59□□□□□ -1.67
COL6A5-203ENST00000373157 PRRT3Q5FWE3 981 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 C9orf131Q5VYM1 1079 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 USPL1Q5W0Q7 1092 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 FBF1Q8TES7 1133 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 PLVAPQ9BX97 442 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 DNAJC25Q9H1X3 360 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 GPAMQ9HCL2 828 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 FOXD3Q9UJU5 478 aaPredicted RBP4.59□□□□□ -1.67
COL6A5-203ENST00000373157 RIPOR2Q9Y4F9 1068 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 KCNMB2Q9Y691 235 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 CLSPNQ9HAW4 1339 aa4.59□□□□□ -1.67
COL6A5-203ENST00000373157 UBAP1LF5GYI3 381 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 MARCH6O60337 910 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 CPNE3O75131 537 aaKnown RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 TNFRSF21O75509 655 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 CENPBP07199 599 aaPredicted RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 ITGAEP38570 1179 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 HDLBPQ00341 1268 aaKnown RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 ZNF438Q7Z4V0 828 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 GPATCH11Q8N954 259 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 CEP63Q96MT8 703 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 RUBCNLQ9H714 662 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 ATXN7L1Q9ULK2 861 aaPredicted RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 FNDC3AQ9Y2H6 1198 aaKnown RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 GJA3Q9Y6H8 435 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 ERCC5P28715 1186 aaPredicted RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 GRNP28799 593 aaKnown RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 TYRO3Q06418 890 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 XKR5Q6UX68 686 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 CHSY3Q70JA7 882 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 SREK1Q8WXA9 508 aaKnown RBP4.58□□□□□ -1.68
COL6A5-203ENST00000373157 TRIM11Q96F44 468 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 ELP3Q9H9T3 547 aa4.58□□□□□ -1.68
COL6A5-203ENST00000373157 NEFMP07197 916 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 MCCP23508 829 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.57□□□□□ -1.68
COL6A5-203ENST00000373157 PDE12Q6L8Q7 609 aaKnown RBP4.57□□□□□ -1.68
COL6A5-203ENST00000373157 PI16Q6UXB8 463 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 SNX29Q8TEQ0 813 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 C8orf37Q96NL8 207 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 DNAJC2Q99543 621 aaKnown RBP4.57□□□□□ -1.68
COL6A5-203ENST00000373157 HIRIP3Q9BW71 556 aaPredicted RBP4.57□□□□□ -1.68
COL6A5-203ENST00000373157 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 CRISPLD1Q9H336 500 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 ZFYVE28Q9HCC9 887 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 TMEM63CQ9P1W3 806 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 PPP1R1BQ9UD71 204 aaPredicted RBP4.57□□□□□ -1.68
COL6A5-203ENST00000373157 RNF112Q9ULX5 631 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 AK5Q9Y6K8 562 aa4.57□□□□□ -1.68
COL6A5-203ENST00000373157 TPD52L2O43399 206 aaKnown RBP4.56□□□□□ -1.68
COL6A5-203ENST00000373157 PHACTR2O75167 634 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 XYLBO75191 536 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 EPB42P16452 691 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 IRAK1P51617 712 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 ZC3H6P61129 1189 aaKnown RBP4.56□□□□□ -1.68
COL6A5-203ENST00000373157 EPS8L3Q8TE67 593 aaKnown RBP4.56□□□□□ -1.68
COL6A5-203ENST00000373157 CCDC74AQ96AQ1 378 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 FRMD6Q96NE9 622 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 PRDM10Q9NQV6 1147 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 SPG7Q9UQ90 795 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 RNF114Q9Y508 228 aa4.56□□□□□ -1.68
COL6A5-203ENST00000373157 C2CD2LO14523 706 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 POLR3DP05423 398 aaPredicted RBP4.55□□□□□ -1.68
COL6A5-203ENST00000373157 PTMAP06454 111 aaKnown RBP4.55□□□□□ -1.68
COL6A5-203ENST00000373157 CTSHP09668 335 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 EIF4BP23588 611 aaKnown RBP4.55□□□□□ -1.68
COL6A5-203ENST00000373157 FANCCQ00597 558 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 METTL16Q86W50 562 aaKnown RBP4.55□□□□□ -1.68
COL6A5-203ENST00000373157 NT5DC4Q86YG4 428 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 PGBD3Q8N328 593 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 ZCCHC2Q9C0B9 1178 aaKnown RBP4.55□□□□□ -1.68
COL6A5-203ENST00000373157 BRD7Q9NPI1 651 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 RAD51AP2Q09MP3 1159 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 NAALADL2Q58DX5 795 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 NLRP8Q86W28 1048 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 C1orf127Q8N9H9 656 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 RNF34Q969K3 372 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 CRELD1Q96HD1 420 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 OSBPL7Q9BZF2 842 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 CHRDQ9H2X0 955 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 METTL5Q9NRN9 209 aaKnown RBP4.55□□□□□ -1.68
COL6A5-203ENST00000373157 NLRP2Q9NX02 1062 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 CNTN3Q9P232 1028 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 PPME1Q9Y570 386 aa4.55□□□□□ -1.68
COL6A5-203ENST00000373157 EREGO14944 169 aa4.54□□□□□ -1.68
COL6A5-203ENST00000373157 EGFRP00533 1210 aa4.54□□□□□ -1.68
COL6A5-203ENST00000373157 THBS1P07996 1170 aa4.54□□□□□ -1.68
COL6A5-203ENST00000373157 ZNF76P36508 570 aa4.54□□□□□ -1.68
COL6A5-203ENST00000373157 UBAP2LQ14157 1087 aaKnown RBP4.54□□□□□ -1.68
COL6A5-203ENST00000373157 EFHC2Q5JST6 749 aa4.54□□□□□ -1.68
COL6A5-203ENST00000373157 SAMD5Q5TGI4 173 aa4.54□□□□□ -1.68
COL6A5-203ENST00000373157 CNPY4Q8N129 248 aa4.54□□□□□ -1.68
COL6A5-203ENST00000373157 UBXN4Q92575 508 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms