RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ZNF165P49910 485 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
SMC3-201ENST00000361804 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 IFFO2Q5TF58 517 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 CACTINQ8WUQ7 758 aaKnown RBP12.5□□□□□ -0.41
SMC3-201ENST00000361804 PRIMPOLQ96LW4 560 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 MAP7D2Q96T17 732 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
SMC3-201ENST00000361804 NEK1Q96PY6 1258 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 GOLPH3LQ9H4A5 285 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMC3-201ENST00000361804 V9GYY5 206 aaPredicted RBP12.5□□□□□ -0.41
SMC3-201ENST00000361804 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
SMC3-201ENST00000361804 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
SMC3-201ENST00000361804 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 NLRP2Q9NX02 1062 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 TIMM10P62072 90 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 RESTQ13127 1097 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
SMC3-201ENST00000361804 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 GTF3C6Q969F1 213 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 DOCK2Q92608 1830 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 ZNF75DP51815 510 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 FOXO4P98177 505 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
SMC3-201ENST00000361804 GOLIM4O00461 696 aa12.48□□□□□ -0.41
SMC3-201ENST00000361804 ZSCAN25Q6NSZ9 544 aa12.48□□□□□ -0.41
SMC3-201ENST00000361804 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
SMC3-201ENST00000361804 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
SMC3-201ENST00000361804 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
SMC3-201ENST00000361804 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
SMC3-201ENST00000361804 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
SMC3-201ENST00000361804 LAMB2P55268 1798 aa12.48□□□□□ -0.41
SMC3-201ENST00000361804 BCORQ6W2J9 1755 aa12.48□□□□□ -0.41
SMC3-201ENST00000361804 A0A087WZG4 1122 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 PDCP20941 246 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 NEXNQ0ZGT2 675 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 FILIP1Q7Z7B0 1213 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 USP28Q96RU2 1077 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 SCAND2PQ9GZW5 306 aaPredicted RBP12.47□□□□□ -0.41
SMC3-201ENST00000361804 TRMT1Q9NXH9 659 aaKnown RBP12.47□□□□□ -0.41
SMC3-201ENST00000361804 GTF2F1P35269 517 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMC3-201ENST00000361804 HAND2P61296 217 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
SMC3-201ENST00000361804 FOXP2O15409 715 aa12.46□□□□□ -0.41
SMC3-201ENST00000361804 PTPN21Q16825 1174 aa12.46□□□□□ -0.41
SMC3-201ENST00000361804 TTLL7Q6ZT98 887 aa12.46□□□□□ -0.41
SMC3-201ENST00000361804 ELP1O95163 1332 aa12.46□□□□□ -0.41
SMC3-201ENST00000361804 PLA2G4DQ86XP0 818 aa12.46□□□□□ -0.41
SMC3-201ENST00000361804 HIP1O00291 1037 aa12.46□□□□□ -0.42
SMC3-201ENST00000361804 TNNT1P13805 278 aa12.46□□□□□ -0.42
SMC3-201ENST00000361804 ZSCAN20P17040 1043 aaPredicted RBP12.46□□□□□ -0.42
SMC3-201ENST00000361804 ADD1P35611 737 aaKnown RBP12.46□□□□□ -0.42
SMC3-201ENST00000361804 ATG9AQ7Z3C6 839 aa12.46□□□□□ -0.42
SMC3-201ENST00000361804 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.42
SMC3-201ENST00000361804 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.42
SMC3-201ENST00000361804 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 NPHP1O15259 732 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 ANKRD1Q15327 319 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 NKX2-3Q8TAU0 364 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 PALLDQ8WX93 1383 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 SLAIN2Q9P270 581 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 NCBP1Q09161 790 aaKnown RBP12.45□□□□□ -0.42
SMC3-201ENST00000361804 CHAF1AQ13111 956 aaPredicted RBP12.45□□□□□ -0.42
SMC3-201ENST00000361804 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
SMC3-201ENST00000361804 NSUN7Q8NE18 718 aaKnown RBP12.45□□□□□ -0.42
SMC3-201ENST00000361804 ATP5JP18859 108 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
SMC3-201ENST00000361804 DDX19AQ9NUU7 478 aaKnown RBP12.44□□□□□ -0.42
SMC3-201ENST00000361804 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
SMC3-201ENST00000361804 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 C4BP0C0L5 1744 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 BIN1O00499 593 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
SMC3-201ENST00000361804 ATF3P18847 181 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 MCMDC2Q4G0Z9 681 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 FMNL2Q96PY5 1086 aa12.44□□□□□ -0.42
SMC3-201ENST00000361804 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
SMC3-201ENST00000361804 IQCB1Q15051 598 aa12.43□□□□□ -0.42
SMC3-201ENST00000361804 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
SMC3-201ENST00000361804 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
SMC3-201ENST00000361804 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
SMC3-201ENST00000361804 ME1P48163 572 aa12.43□□□□□ -0.42
SMC3-201ENST00000361804 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
SMC3-201ENST00000361804 DENND2AQ9ULE3 1009 aa12.43□□□□□ -0.42
SMC3-201ENST00000361804 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
SMC3-201ENST00000361804 MTERF4Q7Z6M4 381 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms