RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PUS3Q9BZE2 481 aaKnown RBP10.11□□□□□ -0.79
RFX3-202ENST00000358730 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 M0R2C6 588 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 RNF113AO15541 343 aaKnown RBP10.1□□□□□ -0.79
RFX3-202ENST00000358730 PPFIA3O75145 1194 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 CIAO1O76071 339 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 CHST3Q7LGC8 479 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 KIAA1524Q8TCG1 905 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 MAP7D2Q96T17 732 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 FTOQ9C0B1 505 aaKnown RBP eCLIP10.1□□□□□ -0.79
RFX3-202ENST00000358730 DNAJC25Q9H1X3 360 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 ZNF330Q9Y3S2 320 aaPredicted RBP10.1□□□□□ -0.79
RFX3-202ENST00000358730 ZNF165P49910 485 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 EXOSC10Q01780 885 aaKnown RBP10.1□□□□□ -0.79
RFX3-202ENST00000358730 FKBP4Q02790 459 aaKnown RBP eCLIP10.1□□□□□ -0.79
RFX3-202ENST00000358730 AGXT2Q9BYV1 514 aa10.1□□□□□ -0.79
RFX3-202ENST00000358730 PTGS1P23219 599 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 GORABQ5T7V8 394 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 TTLL5Q6EMB2 1281 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 DRC7Q8IY82 874 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 TRIM5Q9C035 493 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 GUCY1B3Q02153 619 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 CCDC57Q2TAC2 916 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 TICAM2Q86XR7 235 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 TDRD7Q8NHU6 1098 aaKnown RBP10.09□□□□□ -0.79
RFX3-202ENST00000358730 ATG3Q9NT62 314 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 COL5A2P05997 1499 aaPredicted RBP10.09□□□□□ -0.79
RFX3-202ENST00000358730 SALL1Q9NSC2 1324 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 SHANK3Q9BYB0 1731 aa10.09□□□□□ -0.79
RFX3-202ENST00000358730 ADD1P35611 737 aaKnown RBP10.08□□□□□ -0.8
RFX3-202ENST00000358730 OSBP2Q969R2 916 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 CCDC85AQ96PX6 553 aaPredicted RBP10.08□□□□□ -0.8
RFX3-202ENST00000358730 CARMIL3Q8ND23 1372 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 TNS2Q63HR2 1409 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 PDIA3P30101 505 aaKnown RBP10.08□□□□□ -0.8
RFX3-202ENST00000358730 ADORA1P30542 326 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 CCDC158Q5M9N0 1113 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 CCDC73Q6ZRK6 1079 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
RFX3-202ENST00000358730 USP28Q96RU2 1077 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 NWD2Q9ULI1 1742 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.08□□□□□ -0.8
RFX3-202ENST00000358730 IL2RBP14784 551 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 ZNF75DP51815 510 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 HAND2P61296 217 aa10.08□□□□□ -0.8
RFX3-202ENST00000358730 LRRFIP1Q32MZ4 808 aaKnown RBP10.08□□□□□ -0.8
RFX3-202ENST00000358730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.08□□□□□ -0.8
RFX3-202ENST00000358730 ZNF396Q96N95 335 aaPredicted RBP10.08□□□□□ -0.8
RFX3-202ENST00000358730 HSP90AB3PQ58FF7 597 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 TAF7LQ5H9L4 462 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 CCDC186Q7Z3E2 898 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 MTERF4Q7Z6M4 381 aaKnown RBP10.07□□□□□ -0.8
RFX3-202ENST00000358730 PLA2G4DQ86XP0 818 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 ZNF274Q96GC6 653 aaPredicted RBP10.07□□□□□ -0.8
RFX3-202ENST00000358730 ISCA1Q9BUE6 129 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 RCOR1Q9UKL0 485 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 MYH7P12883 1935 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 GOLGA6L19H0YKK7 550 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 KINO60870 393 aaKnown RBP10.07□□□□□ -0.8
RFX3-202ENST00000358730 CAVIN2O95810 425 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 ME1P48163 572 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 CHAF1AQ13111 956 aaPredicted RBP10.07□□□□□ -0.8
RFX3-202ENST00000358730 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
RFX3-202ENST00000358730 BRINP3Q76B58 766 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 ARID3AQ99856 593 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 AKAP2Q9Y2D5 859 aa10.07□□□□□ -0.8
RFX3-202ENST00000358730 TOGARAM1Q9Y4F4 1720 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 CTAGE5O15320 804 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
RFX3-202ENST00000358730 STX1AQ16623 288 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.06□□□□□ -0.8
RFX3-202ENST00000358730 TSC1Q92574 1164 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
RFX3-202ENST00000358730 STRN4Q9NRL3 753 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 CTNNA3Q9UI47 895 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 ZFYP08048 801 aaPredicted RBP10.06□□□□□ -0.8
RFX3-202ENST00000358730 LRMPQ12912 555 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 TCIRG1Q13488 830 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 SCARF1Q14162 830 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 ATL3Q6DD88 541 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 C11orf57Q6ZUT1 292 aaPredicted RBP10.06□□□□□ -0.8
RFX3-202ENST00000358730 VSIG10Q8N0Z9 540 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 CHMP4CQ96CF2 233 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 CLIP2Q9UDT6 1046 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 NRBP1Q9UHY1 535 aa10.06□□□□□ -0.8
RFX3-202ENST00000358730 GOLGA8BA8MQT2 603 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 FOXP2O15409 715 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 GTF2F1P35269 517 aaKnown RBP eCLIP10.05□□□□□ -0.8
RFX3-202ENST00000358730 KIF6Q6ZMV9 814 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 ILDR1Q86SU0 546 aaPredicted RBP10.05□□□□□ -0.8
RFX3-202ENST00000358730 FSIP1Q8NA03 581 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 FAM89AQ96GI7 184 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
RFX3-202ENST00000358730 ZAP70P43403 619 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 FAM160A1Q05DH4 1040 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms