RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PTGS1P23219 599 aa15.05■□□□□ -0
SCN8A-202ENST00000355133 RRP36Q96EU6 259 aaKnown RBP15.05■□□□□ -0
SCN8A-202ENST00000355133 TCHPQ9BT92 498 aa15.05■□□□□ -0
SCN8A-202ENST00000355133 TNNQ9UQP3 1299 aa15.05■□□□□ -0
SCN8A-202ENST00000355133 RRP9O43818 475 aaKnown RBP15.05■□□□□ -0
SCN8A-202ENST00000355133 APOBRQ0VD83 1088 aa15.05■□□□□ -0
SCN8A-202ENST00000355133 AOPEPQ8N6M6 819 aa15.05■□□□□ -0
SCN8A-202ENST00000355133 TSPYL6Q8N831 410 aa15.05■□□□□ -0
SCN8A-202ENST00000355133 CTAGE1Q96RT6 745 aa15.05■□□□□ -0
SCN8A-202ENST00000355133 LRSAM1Q6UWE0 723 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 LINS1Q8NG48 757 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 DACT1Q9NYF0 836 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 SPDYE3A6NKU9 549 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 CAVIN2O95810 425 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 RXRAP19793 462 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 ARID5AQ03989 594 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
SCN8A-202ENST00000355133 USP37Q86T82 979 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 GJC1P36383 396 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 DPH6Q7L8W6 267 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 EHBP1Q8NDI1 1231 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 FAM212AQ96EL1 285 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 ZBTB21Q9ULJ3 1066 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 TRIM75PA6NK02 468 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 ZNF608Q9ULD9 1512 aaPredicted RBP15.04■□□□□ -0
SCN8A-202ENST00000355133 PSMA7O14818 248 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 DNAJC25Q9H1X3 360 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 IKBKGQ9Y6K9 419 aa15.04■□□□□ -0
SCN8A-202ENST00000355133 F13A1P00488 732 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 THOC2Q8NI27 1593 aaKnown RBP15.03■□□□□ -0
SCN8A-202ENST00000355133 CYLC1P35663 651 aaPredicted RBP15.03■□□□□ -0
SCN8A-202ENST00000355133 AKNAD1Q5T1N1 836 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 GNAT2P19087 354 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 MCM7P33993 719 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 TSNARE1Q96NA8 513 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 RTL9Q8NET4 1388 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 KRT2P35908 639 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 FAM107BQ9H098 131 aa15.03■□□□□ -0
SCN8A-202ENST00000355133 WDR7Q9Y4E6 1490 aa15.02■□□□□ -0
SCN8A-202ENST00000355133 PABPN1LA6NDY0 278 aaKnown RBP15.02■□□□□ -0
SCN8A-202ENST00000355133 LDHBP07195 334 aaKnown RBP15.02■□□□□ -0
SCN8A-202ENST00000355133 TMEM110-MUSTN1A8MSY1 372 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 SPTLC2O15270 562 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 PLIN2Q99541 437 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 FLT4P35916 1363 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 KRT79Q5XKE5 535 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 CEP85Q6P2H3 762 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 MICALCLQ6ZW33 695 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 PPP1R14CQ8TAE6 165 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 JDP2Q8WYK2 163 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 BICC1Q9H694 974 aaKnown RBP15.02□□□□□ -0.01
SCN8A-202ENST00000355133 RTL1A6NKG5 1358 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 MAP3K5Q99683 1374 aa15.02□□□□□ -0.01
SCN8A-202ENST00000355133 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
SCN8A-202ENST00000355133 PLCH2O75038 1416 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 FAM13AO94988 1023 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 SP4Q02446 784 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 CREB3L3Q68CJ9 461 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 ZKSCAN3Q9BRR0 538 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 GTF2F1P35269 517 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCN8A-202ENST00000355133 TRERF1Q96PN7 1200 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 EYA1Q99502 592 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 TTC41PQ6P2S7 1318 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 SKILP12757 684 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 CEP112Q8N8E3 955 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 PLCG2P16885 1265 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 TERF1P54274 439 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 AK2P54819 239 aa15.01□□□□□ -0.01
SCN8A-202ENST00000355133 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCN8A-202ENST00000355133 STX17P56962 302 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 SPAG1Q07617 926 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 SAP30BPQ9UHR5 308 aaKnown RBP15□□□□□ -0.01
SCN8A-202ENST00000355133 NCKAP5LQ9HCH0 1330 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 HSF2BPO75031 334 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 CCDC186Q7Z3E2 898 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 DCAF5Q96JK2 942 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 IMPG2Q9BZV3 1241 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
SCN8A-202ENST00000355133 GCP02774 474 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 CALML3P27482 149 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 POLD1P28340 1107 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 HSPA2P54652 639 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 MAP3K9P80192 1104 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 PLVAPQ9BX97 442 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 ANKRD2Q9GZV1 360 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 GNPATO15228 680 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 A0A1W2PRG0 241 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 RNMTO43148 476 aaKnown RBP15□□□□□ -0.01
SCN8A-202ENST00000355133 CEP63Q96MT8 703 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 DNAI1Q9UI46 699 aa15□□□□□ -0.01
SCN8A-202ENST00000355133 EEF2P13639 858 aaKnown RBP14.99□□□□□ -0.01
SCN8A-202ENST00000355133 PHACTR3Q96KR7 559 aa14.99□□□□□ -0.01
SCN8A-202ENST00000355133 VAMP4O75379 141 aa14.99□□□□□ -0.01
SCN8A-202ENST00000355133 LMOD1P29536 600 aaPredicted RBP14.99□□□□□ -0.01
SCN8A-202ENST00000355133 FAM200AQ8TCP9 573 aa14.99□□□□□ -0.01
SCN8A-202ENST00000355133 PTPDC1A2A3K4 754 aa14.99□□□□□ -0.01
SCN8A-202ENST00000355133 CKAP4Q07065 602 aaKnown RBP14.99□□□□□ -0.01
SCN8A-202ENST00000355133 GIMAP7Q8NHV1 300 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms