RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ARID3AQ99856 593 aa7.17□□□□□ -1.26
CLCN3-201ENST00000347613 ITGB4P16144 1822 aa7.17□□□□□ -1.26
CLCN3-201ENST00000347613 DDX60Q8IY21 1712 aaKnown RBP7.17□□□□□ -1.26
CLCN3-201ENST00000347613 GPTP24298 496 aa7.17□□□□□ -1.26
CLCN3-201ENST00000347613 FKBP4Q02790 459 aaKnown RBP eCLIP7.17□□□□□ -1.26
CLCN3-201ENST00000347613 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
CLCN3-201ENST00000347613 SMARCC2Q8TAQ2 1214 aa7.17□□□□□ -1.26
CLCN3-201ENST00000347613 SALL1Q9NSC2 1324 aa7.17□□□□□ -1.26
CLCN3-201ENST00000347613 ZAP70P43403 619 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 ANTXR2P58335 489 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 SNW1Q13573 536 aaKnown RBP7.16□□□□□ -1.26
CLCN3-201ENST00000347613 AIFM3Q96NN9 605 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 PRDM11Q9NQV5 511 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 CWC25Q9NXE8 425 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-201ENST00000347613 NEDD4P46934 1319 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 EYA2O00167 538 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 PDIA3P30101 505 aaKnown RBP7.16□□□□□ -1.26
CLCN3-201ENST00000347613 ANO6Q4KMQ2 910 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 C11orf57Q6ZUT1 292 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-201ENST00000347613 PAXIP1Q6ZW49 1069 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-201ENST00000347613 USP28Q96RU2 1077 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 ISCA1Q9BUE6 129 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 CBX8Q9HC52 389 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 HPS5Q9UPZ3 1129 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 TNS2Q63HR2 1409 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 TAF1P21675 1872 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 SH3TC1Q8TE82 1336 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 TYRO3Q06418 890 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 NKX1-1Q15270 411 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-201ENST00000347613 CCDC144BQ3MJ40 725 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 SMIM5Q71RC9 77 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 CCDC144CPQ8IYA2 1237 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 ANP32BQ92688 251 aaKnown RBP7.16□□□□□ -1.26
CLCN3-201ENST00000347613 XAGE2Q96GT9 111 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 AGXT2Q9BYV1 514 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 GREM2Q9H772 168 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 ATG3Q9NT62 314 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 RIC1Q4ADV7 1423 aa7.16□□□□□ -1.26
CLCN3-201ENST00000347613 UQCRHLA0A096LP55 91 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 UQCRHP07919 91 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 RXRAP19793 462 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 PSMA5P28066 241 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 MCAMP43121 646 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 ZNF710Q8N1W2 664 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 SPATA32Q96LK8 384 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 DNAJC25Q9H1X3 360 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 CCDC39Q9UFE4 941 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 PTPDC1A2A3K4 754 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 KIF28PB7ZC32 967 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 PFKFB2O60825 505 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 FGAP02671 866 aa7.15□□□□□ -1.26
CLCN3-201ENST00000347613 HELBQ8NG08 1087 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-201ENST00000347613 ABCC6O95255 1503 aa7.15□□□□□ -1.27
CLCN3-201ENST00000347613 HIP1O00291 1037 aa7.15□□□□□ -1.27
CLCN3-201ENST00000347613 IFIT1P09914 478 aaKnown RBP7.15□□□□□ -1.27
CLCN3-201ENST00000347613 HSP90B1P14625 803 aaKnown RBP7.15□□□□□ -1.27
CLCN3-201ENST00000347613 PTGS1P23219 599 aa7.15□□□□□ -1.27
CLCN3-201ENST00000347613 NOLC1Q14978 699 aaKnown RBP eCLIP7.15□□□□□ -1.27
CLCN3-201ENST00000347613 RBM43Q6ZSC3 357 aaKnown RBP7.15□□□□□ -1.27
CLCN3-201ENST00000347613 SLC51AQ86UW1 340 aa7.15□□□□□ -1.27
CLCN3-201ENST00000347613 FBXW7Q969H0 707 aa7.15□□□□□ -1.27
CLCN3-201ENST00000347613 SOS2Q07890 1332 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-201ENST00000347613 KRT85P78386 507 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 DHX32Q7L7V1 743 aaKnown RBP7.14□□□□□ -1.27
CLCN3-201ENST00000347613 VSIG10Q8N0Z9 540 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 SLAIN2Q9P270 581 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 ECM29Q5VYK3 1845 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 C4AP0C0L4 1744 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 C4BP0C0L5 1744 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 ELP1O95163 1332 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 PCDH11XQ9BZA7 1347 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 PCDH11YQ9BZA8 1340 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 IL2RBP14784 551 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 TCIRG1Q13488 830 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 CADPS2Q86UW7 1296 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 FAM13BQ9NYF5 915 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 HMG20BQ9P0W2 317 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 CLIC4Q9Y696 253 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 NUP98P52948 1817 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 UBN2Q6ZU65 1347 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 MYH7P12883 1935 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 ERVV-2B6SEH9 535 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 RNF113AO15541 343 aaKnown RBP7.14□□□□□ -1.27
CLCN3-201ENST00000347613 PTMAP06454 111 aaKnown RBP7.14□□□□□ -1.27
CLCN3-201ENST00000347613 RNF20Q5VTR2 975 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 CYB5R4Q7L1T6 521 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 CCDC191Q8NCU4 936 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 PIBF1Q8WXW3 757 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 SYAP1Q96A49 352 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-201ENST00000347613 PIH1D3Q9NQM4 214 aaKnown RBP7.14□□□□□ -1.27
CLCN3-201ENST00000347613 RIPOR2Q9Y4F9 1068 aa7.14□□□□□ -1.27
CLCN3-201ENST00000347613 U3KPZ7 1027 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-201ENST00000347613 CSF1RP07333 972 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 IL15P40933 162 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-201ENST00000347613 HSP90AA2PQ14568 343 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-201ENST00000347613 NAA30Q147X3 362 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-201ENST00000347613 PTPN21Q16825 1174 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 VGLL2Q8N8G2 317 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 ENGASEQ8NFI3 743 aa7.13□□□□□ -1.27
CLCN3-201ENST00000347613 TTLL11Q8NHH1 800 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms