RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 ZSWIM4Q9H7M6 989 aa18.9■□□□□ 0.62
NSMCE3-201ENST00000332303 DDX21Q9NR30 783 aaKnown RBP eCLIP18.9■□□□□ 0.62
NSMCE3-201ENST00000332303 CREB3L3Q68CJ9 461 aa18.89■□□□□ 0.62
NSMCE3-201ENST00000332303 ZNF518AQ6AHZ1 1483 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 IRS4O14654 1257 aaPredicted RBP18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 CKAP4Q07065 602 aaKnown RBP18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 KRT24Q2M2I5 525 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 PLEKHM2Q8IWE5 1019 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 ZC3H12CQ9C0D7 883 aaKnown RBP18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 PUF60Q9UHX1 559 aaKnown RBP18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 ZFYVE9O95405 1425 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 DYNC1I1O14576 645 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 AK2P54819 239 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 DNAJC25Q9H1X3 360 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 KIAA0753Q2KHM9 967 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 TBC1D5Q92609 795 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 TNNQ9UQP3 1299 aa18.89■□□□□ 0.61
NSMCE3-201ENST00000332303 BICD1Q96G01 975 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 UGGT2Q9NYU1 1516 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 ASXL2Q76L83 1435 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 KRT13P13646 458 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 AOPEPQ8N6M6 819 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 RTL9Q8NET4 1388 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 CHMLP26374 656 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 DHX37Q8IY37 1157 aaKnown RBP18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 FERMT1Q9BQL6 677 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 CARD14Q9BXL6 1004 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 GTPBP4Q9BZE4 634 aaKnown RBP18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 CALCOCO1Q9P1Z2 691 aa18.88■□□□□ 0.61
NSMCE3-201ENST00000332303 TUBB4AP04350 444 aa18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 F8W031 263 aaPredicted RBP18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 KRT79Q5XKE5 535 aa18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 BRAPQ7Z569 592 aa18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 CCDC97Q96F63 343 aaPredicted RBP18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 HSP90AA4PQ58FG1 418 aa18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 MAATS1Q7Z4T9 603 aa18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 TEX14Q8IWB6 1497 aa18.87■□□□□ 0.61
NSMCE3-201ENST00000332303 MAP3K19Q56UN5 1328 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 NOLC1Q14978 699 aaKnown RBP eCLIP18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 BBXQ8WY36 941 aaPredicted RBP18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 MCM9Q9NXL9 1143 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 LMOD1P29536 600 aaPredicted RBP18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 CABLES1Q8TDN4 633 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 DHX58Q96C10 678 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 DNAI1Q9UI46 699 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 SBNO2Q9Y2G9 1366 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 SMARCC2Q8TAQ2 1214 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 NSFL1CQ9UNZ2 370 aaKnown RBP18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 CTAGE15A4D2H0 777 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 CTAGE8P0CG41 777 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 TYRO3Q06418 890 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 CTAGE6Q86UF2 777 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 CTAGE4Q8IX94 777 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 HELBQ8NG08 1087 aaPredicted RBP18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 IP6K1Q92551 441 aa18.86■□□□□ 0.61
NSMCE3-201ENST00000332303 PTPDC1A2A3K4 754 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 XRCC6P12956 609 aaKnown RBP eCLIP18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 TFCP2Q12800 502 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 UBE4AQ14139 1066 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 GNA11P29992 359 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 PICALMQ13492 652 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 STAMBPO95630 424 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 APOBRQ0VD83 1088 aa18.85■□□□□ 0.61
NSMCE3-201ENST00000332303 RNF187Q5TA31 235 aaPredicted RBP18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 RTCBQ9Y3I0 505 aaKnown RBP18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 NUP153P49790 1475 aaKnown RBP18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 RNMTO43148 476 aaKnown RBP18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 TACC1O75410 805 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 CEP112Q8N8E3 955 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 DDX12PQ92771 950 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 MMRN2Q9H8L6 949 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 ARFGAP3Q9NP61 516 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 SYCP2Q9BX26 1530 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 SYT1P21579 422 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 ANKRD2Q9GZV1 360 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 BABAM1Q9NWV8 329 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 SPDYE3A6NKU9 549 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 RUFY3Q7L099 469 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 MAGEB6Q8N7X4 407 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 RRP36Q96EU6 259 aaKnown RBP18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 ZKSCAN5Q9Y2L8 839 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 A0A1W2PP64 1363 aa18.84■□□□□ 0.61
NSMCE3-201ENST00000332303 RAPGEF6Q8TEU7 1601 aa18.83■□□□□ 0.61
NSMCE3-201ENST00000332303 SPECC1LQ69YQ0 1117 aa18.83■□□□□ 0.61
NSMCE3-201ENST00000332303 ATL3Q6DD88 541 aa18.83■□□□□ 0.61
NSMCE3-201ENST00000332303 MAPKBP1O60336 1514 aa18.83■□□□□ 0.61
NSMCE3-201ENST00000332303 HOXC9P31274 260 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 PRPHP41219 470 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 CHST3Q7LGC8 479 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 MIGA1Q8NAN2 632 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 SRRTQ9BXP5 876 aaKnown RBP18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 HOMER2Q9NSB8 354 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 HS2ST1Q7LGA3 356 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 TBX22Q9Y458 520 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 UBAP1LF5GYI3 381 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms