RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 AIFM3Q96NN9 605 aa22.19■■□□□ 1.14
SPSB1-201ENST00000328089 PRDM10Q9NQV6 1147 aa22.19■■□□□ 1.14
SPSB1-201ENST00000328089 CPLX1O14810 134 aa22.19■■□□□ 1.14
SPSB1-201ENST00000328089 RESTQ13127 1097 aa22.19■■□□□ 1.14
SPSB1-201ENST00000328089 HLFQ16534 295 aa22.19■■□□□ 1.14
SPSB1-201ENST00000328089 SDF4Q9BRK5 362 aa22.19■■□□□ 1.14
SPSB1-201ENST00000328089 MYL10Q9BUA6 226 aa22.19■■□□□ 1.14
SPSB1-201ENST00000328089 IQSEC3Q9UPP2 1182 aaPredicted RBP22.19■■□□□ 1.14
SPSB1-201ENST00000328089 MED1Q15648 1581 aaPredicted RBP22.19■■□□□ 1.14
SPSB1-201ENST00000328089 RNF113AO15541 343 aaKnown RBP22.18■■□□□ 1.14
SPSB1-201ENST00000328089 CHMP4CQ96CF2 233 aa22.18■■□□□ 1.14
SPSB1-201ENST00000328089 BECN2A8MW95 431 aa22.18■■□□□ 1.14
SPSB1-201ENST00000328089 PIBF1Q8WXW3 757 aa22.18■■□□□ 1.14
SPSB1-201ENST00000328089 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 GOLGA8BA8MQT2 603 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 PTPN21Q16825 1174 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 C11orf57Q6ZUT1 292 aaPredicted RBP22.17■■□□□ 1.14
SPSB1-201ENST00000328089 GOLPH3LQ9H4A5 285 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 GOLGA6L19H0YKK7 550 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 IFIT5Q13325 482 aaKnown RBP22.17■■□□□ 1.14
SPSB1-201ENST00000328089 FSIP1Q8NA03 581 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 FGAP02671 866 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 GLIPR1L2Q4G1C9 344 aa22.17■■□□□ 1.14
SPSB1-201ENST00000328089 IL2RBP14784 551 aa22.16■■□□□ 1.14
SPSB1-201ENST00000328089 MARCKSP29966 332 aaPredicted RBP22.16■■□□□ 1.14
SPSB1-201ENST00000328089 PDIA3P30101 505 aaKnown RBP22.16■■□□□ 1.14
SPSB1-201ENST00000328089 USPL1Q5W0Q7 1092 aa22.16■■□□□ 1.14
SPSB1-201ENST00000328089 BRINP3Q76B58 766 aa22.16■■□□□ 1.14
SPSB1-201ENST00000328089 MCM5P33992 734 aa22.16■■□□□ 1.14
SPSB1-201ENST00000328089 CCDC73Q6ZRK6 1079 aa22.16■■□□□ 1.14
SPSB1-201ENST00000328089 KDM3BQ7LBC6 1761 aa22.16■■□□□ 1.14
SPSB1-201ENST00000328089 RRP12Q5JTH9 1297 aaKnown RBP22.15■■□□□ 1.14
SPSB1-201ENST00000328089 RALYLQ86SE5 291 aaKnown RBP22.15■■□□□ 1.14
SPSB1-201ENST00000328089 NKX2-3Q8TAU0 364 aa22.15■■□□□ 1.14
SPSB1-201ENST00000328089 GREM2Q9H772 168 aa22.15■■□□□ 1.14
SPSB1-201ENST00000328089 TUBGCP6Q96RT7 1819 aa22.15■■□□□ 1.14
SPSB1-201ENST00000328089 UBE2Q2LH0YL09 131 aa22.15■■□□□ 1.14
SPSB1-201ENST00000328089 ATP2B1P20020 1258 aa22.15■■□□□ 1.14
SPSB1-201ENST00000328089 ZMYM1Q5SVZ6 1142 aa22.15■■□□□ 1.14
SPSB1-201ENST00000328089 SPATA31A3Q5VYP0 1347 aa22.14■■□□□ 1.14
SPSB1-201ENST00000328089 PRC1O43663 620 aa22.14■■□□□ 1.14
SPSB1-201ENST00000328089 KINO60870 393 aaKnown RBP22.14■■□□□ 1.14
SPSB1-201ENST00000328089 HSP90AA4PQ58FG1 418 aa22.14■■□□□ 1.14
SPSB1-201ENST00000328089 SLC9C2Q5TAH2 1124 aa22.14■■□□□ 1.14
SPSB1-201ENST00000328089 CLSTN2Q9H4D0 955 aa22.14■■□□□ 1.14
SPSB1-201ENST00000328089 TRMT1Q9NXH9 659 aaKnown RBP22.14■■□□□ 1.14
SPSB1-201ENST00000328089 CLIP2Q9UDT6 1046 aa22.14■■□□□ 1.14
SPSB1-201ENST00000328089 CFAP45Q9UL16 551 aa22.14■■□□□ 1.14
SPSB1-201ENST00000328089 CHD2O14647 1828 aaKnown RBP22.14■■□□□ 1.13
SPSB1-201ENST00000328089 MICU3Q86XE3 530 aa22.14■■□□□ 1.13
SPSB1-201ENST00000328089 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
SPSB1-201ENST00000328089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.13■■□□□ 1.13
SPSB1-201ENST00000328089 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
SPSB1-201ENST00000328089 PHKBQ93100 1093 aa22.13■■□□□ 1.13
SPSB1-201ENST00000328089 ORC3Q9UBD5 711 aaPredicted RBP22.13■■□□□ 1.13
SPSB1-201ENST00000328089 PCDH11XQ9BZA7 1347 aa22.13■■□□□ 1.13
SPSB1-201ENST00000328089 PCDH11YQ9BZA8 1340 aa22.13■■□□□ 1.13
SPSB1-201ENST00000328089 GNL2Q13823 731 aaKnown RBP22.13■■□□□ 1.13
SPSB1-201ENST00000328089 CCDC191Q8NCU4 936 aa22.13■■□□□ 1.13
SPSB1-201ENST00000328089 DDX19AQ9NUU7 478 aaKnown RBP22.13■■□□□ 1.13
SPSB1-201ENST00000328089 PFKFB2O60825 505 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 ITGA6P23229 1130 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 ADD1P35611 737 aaKnown RBP22.12■■□□□ 1.13
SPSB1-201ENST00000328089 STK38Q15208 465 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 CLIC4Q9Y696 253 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 GOLGA6L6A8MZA4 724 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 NPHP1O15259 732 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 ZRSR1Q15695 479 aaKnown RBP22.12■■□□□ 1.13
SPSB1-201ENST00000328089 IMMTQ16891 758 aaKnown RBP22.12■■□□□ 1.13
SPSB1-201ENST00000328089 PIGBQ92521 554 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 SENP2Q9HC62 589 aa22.12■■□□□ 1.13
SPSB1-201ENST00000328089 GPAA1O43292 621 aa22.11■■□□□ 1.13
SPSB1-201ENST00000328089 CMTR1Q8N1G2 835 aaKnown RBP22.11■■□□□ 1.13
SPSB1-201ENST00000328089 C8orf76Q96K31 380 aa22.11■■□□□ 1.13
SPSB1-201ENST00000328089 ATP2B3Q16720 1220 aa22.11■■□□□ 1.13
SPSB1-201ENST00000328089 CCDC144BQ3MJ40 725 aa22.11■■□□□ 1.13
SPSB1-201ENST00000328089 ZKSCAN3Q9BRR0 538 aa22.11■■□□□ 1.13
SPSB1-201ENST00000328089 ZNF213O14771 459 aa22.1■■□□□ 1.13
SPSB1-201ENST00000328089 PDCL3Q9H2J4 239 aa22.1■■□□□ 1.13
SPSB1-201ENST00000328089 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
SPSB1-201ENST00000328089 TCIRG1Q13488 830 aa22.1■■□□□ 1.13
SPSB1-201ENST00000328089 NAA30Q147X3 362 aaPredicted RBP22.1■■□□□ 1.13
SPSB1-201ENST00000328089 NFXL1Q6ZNB6 911 aa22.1■■□□□ 1.13
SPSB1-201ENST00000328089 HELLSQ9NRZ9 838 aa22.1■■□□□ 1.13
SPSB1-201ENST00000328089 FDPSP14324 419 aaKnown RBP22.09■■□□□ 1.13
SPSB1-201ENST00000328089 TSGA10IPQ3SY00 556 aa22.09■■□□□ 1.13
SPSB1-201ENST00000328089 AOPEPQ8N6M6 819 aa22.09■■□□□ 1.13
SPSB1-201ENST00000328089 SPECC1Q5M775 1068 aa22.09■■□□□ 1.13
SPSB1-201ENST00000328089 ACSBG1Q96GR2 724 aa22.09■■□□□ 1.13
SPSB1-201ENST00000328089 WDR17Q8IZU2 1322 aa22.09■■□□□ 1.13
SPSB1-201ENST00000328089 B4E1Z4 1266 aa22.09■■□□□ 1.13
SPSB1-201ENST00000328089 KIAA1524Q8TCG1 905 aa22.09■■□□□ 1.13
SPSB1-201ENST00000328089 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.09■■□□□ 1.13
SPSB1-201ENST00000328089 V9GYY5 206 aaPredicted RBP22.09■■□□□ 1.13
SPSB1-201ENST00000328089 SPDYE4A6NLX3 237 aa22.08■■□□□ 1.13
SPSB1-201ENST00000328089 MCAMP43121 646 aa22.08■■□□□ 1.13
SPSB1-201ENST00000328089 LMO7Q8WWI1 1683 aa22.08■■□□□ 1.12
SPSB1-201ENST00000328089 RIOK3O14730 519 aaKnown RBP22.08■■□□□ 1.12
SPSB1-201ENST00000328089 PCDHA7Q9UN72 937 aa22.08■■□□□ 1.12
SPSB1-201ENST00000328089 MST1RQ04912 1400 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms